| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | GCTGGGACTG (3) TGGTTGCTGG TGTTTTTTGT (3)
| 71.7 | 0.0717 |
| Cb medulloblastoma | TGGTTGCTGG TGTTTTTTGT (3)
| 120.2 | 0.1202 |
| P8 GC+1d culture | GACCAAAAAT (3) TGGTTGCTGG TGTTTTTTGT (3)
| 60.5 | 0.0605 |
| P8 GC+SHH+1d culture | TGGTTGCTGG TGTTTTTTGT (3)
| 94.9 | 0.0949 |
| 3T3 fibroblasts | TGGTTGCTGG
| 220.8 | 0.2208 |
| E15 cortex | TGGTTGCTGG
| 277.1 | 0.2771 |
| P1 cortex | TGGTTGCTGG
| 86.4 | 0.0864 |
| Hypothalamus | GACCAAAAAT (3) GCGGGCCTTT (2) TGGTTGCTGG TGTTTTTTGT (3)
| 365.9 | 0.3659 |
| E12.5 retina | GACCAAAAAT (3) TGGTTGCTGG
| 159.6 | 0.1596 |
| E14.5 retina | GACCAAAAAT (3) TGGTTGCTGG TGTTTTTTGT (3)
| 943.7 | 0.9437 |
| E16.5 retina | GACCAAAAAT (3) TGGTTGCTGG TGTTTTTTGT (3)
| 773.3 | 0.7733 |
| E18.5 retina | GACCAAAAAT (3) TGGTTGCTGG
| 254.6 | 0.2546 |
| P0.5 retina | GACCAAAAAT (3) GCGGGCCTTT (2) GCTGGGACTG (3) TGGTTGCTGG TGTTTTTTGT (3)
| 214.1 | 0.2141 |
| P2.5 retina | GACCAAAAAT (3) TGGTTGCTGG TGTTTTTTGT (3)
| 181.3 | 0.1813 |
| P4.5 retina | GACCAAAAAT (3) TGGTTGCTGG TGTTTTTTGT (3)
| 158.5 | 0.1585 |
| P6.5 retina | TGGTTGCTGG TGTTTTTTGT (3)
| 158.4 | 0.1584 |
| P10.5 crx- retina | GACCAAAAAT (3) TGGTTGCTGG TGTTTTTTGT (3)
| 286.1 | 0.2861 |
| P10.5 crx+ retina | GACCAAAAAT (3) TGGTTGCTGG TGTTTTTTGT (3)
| 105.7 | 0.1057 |
| Adult retinal | TGGTTGCTGG TGTTTTTTGT (3)
| 216.7 | 0.2167 |
| ONL | GACCAAAAAT (3) TGGTTGCTGG TGTTTTTTGT (3)
| 402.2 | 0.4022 |