Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.29187	Lmo4	LIM domain only 4	3	3 H2 (3 73.1 cM)	16911
Gene Ontology	protein binding | regulation of transcription, DNA-dependent | transcription factor binding | transcription factor complex | transcription from Pol II promoter
Human Homolog	LMO4[LIM domain only 4]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

Total 29 In Situ Hybridization Images

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SAGE Tags

Total 90 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AACCTGGGCT ACAAAGGTTA AGTTAAAAGG (2) CATACATACT (2) TGAAAAAAAA (2) TTCAGGTTGA (2) 40.6 0.0406 Cb medulloblastoma ACAAAGGTTA CATACATACT (2) TGAAAAAAAA (2) 85.5 0.0855 P8 GC+1d culture AAACCTGGGG (3) AAGCTGGGCT AAGTGGCAAT (3) ACAAAGGTTA CATACATACT (2) CCATCGCGCC TGAAAAAAAA (2) 51.2 0.0512 P8 GC+SHH+1d culture AAGCTGGGCT AAGTGGCAAT (3) ACAAAGGTTA AGTTAAAAGG (2) CATACATACA CCATCGCGCC TGAAAAAAAA (2) TTCAGGTTGA (2) 82.1 0.0821 3T3 fibroblasts CATACATACT (2) TGAAAAAAAA (2) 10.5 0.0105 E15 cortex TGAAAAAAAA (2) TTCAGGTTGA (2) 34.6 0.0346 P1 cortex AAGCTGGGCT ACAAAGGTTA CTCAGGCTGA TGAAAAAAAA (2) 50 0.05 Hypothalamus AAGCTGGGCT AAGTGGCAAT (3) ACAAAGGTTA AGTTAAAATG (3) TGAAAAAAAA (2) TGAGTGTTCT (2) 56.1 0.0561 E12.5 retina ACAAAGGTTA TGAAAAAAAA (2) TTCAGGTTGA (2) 46.9 0.0469 E14.5 retina AACCTGGGCT AAGCTGGGCT ACAAAGGTTA CATACATACA CATACATACT (2) CCATCCGGGG CTCAGGCTGA TGAAAAAAAA (2) 69.1 0.0691 E16.5 retina AAGCTGGGCT ACAAAGGTTA AGTTAAAAGG (2) TGAAAAAAAA (2) TTCAGGTTGA (2) 25.3 0.0253 E18.5 retina ACAAAGGTTA CATACATACA CCATCCGGGG TGAAAAAAAA (2) 89.1 0.0891 P0.5 retina AAGCTGGGCT AAGTGGCAAT (3) ACAAAGGTTA TGAAAAAAAA (2) 45.2 0.0452 P2.5 retina ACAAAGGTTA CATACATACA TGAAAAAAAA (2) TTCAGGTTGA (2) 75.7 0.0757 P4.5 retina AAACCTGGGG (3) ACAAAGGTTA CATACATACA TGAAAAAAAA (2) 65.4 0.0654 P6.5 retina AAACCTGGGG (3) ACAAAGGTTA TGAAAAAAAA (2) 41.7 0.0417 P10.5 crx- retina AACCTGGGCT ACAAAGGTTA TGAAAAAAAA (2) TGAGTGTTCT (2) TTCAGGTTGA (2) 33.5 0.0335 P10.5 crx+ retina ACAAAGGTTA CCATCGCGCC TGAAAAAAAA (2) 30.7 0.0307 Adult retinal AAGCTGGGCT AGTTAAAATG (3) CATACATACA TGAAAAAAAA (2) 18.7 0.0187 ONL ACAAAGGTTA AGTTAAAAGG (2) AGTTAAAATG (3) CATACATACA TGAAAAAAAA (2) 28.7 0.0287