Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.291877	Brpf3	bromodomain and PHD finger containing, 3	17		268936
Gene Ontology	biological_process unknown | cellular_component unknown | molecular_function unknown
Human Homolog	BRPF3[bromodomain and PHD finger containing, 3]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 88 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC ATGCTCTATT (4) CTTCTCTGTG CTTGTCACTC (3) GATGGCCTGA GCACTGCCCT (5) GTGCTGAATA (2) TGTGCTGTTG TTTTTTTTTT (2) 44 0.044 Cb medulloblastoma CTTCTCTGTG CTTGTCACTC (3) TGTGCTGTTG TTTTTTTTTT (2) 16.1 0.0161 P8 GC+1d culture ATGCTCTATT (4) CTTCTCTGTG CTTGTCACTC (3) GCACTGCCCT (5) TGTGCTGTTG TTTTTTTTTT (2) 33.1 0.0331 P8 GC+SHH+1d culture ATGCTCTATT (4) CTTCTCTGTG CTTGTCACTC (3) GCACTGCCCT (5) TGTGCTGTTG TTTTTTTTTT (2) 35.2 0.0352 3T3 fibroblasts ATGCTCTATT (4) CTTCTCTGTG CTTGTCACTC (3) GATGGCCTGA GCACTGCCCT (5) TGTGCTGTTG 38.5 0.0385 E15 cortex CTTGTCACTC (3) TGTGCTGTTG TTTTTTTTTT (2) 14.7 0.0147 P1 cortex CTTCTCTGTG TTTTTTTTTT (2) 18.1 0.0181 Hypothalamus CTTCTCTGTG CTTGTCACTC (3) GTGCTGAATA (2) TGTGCTGTTG TTTTTTTTTT (2) 23.4 0.0234 E12.5 retina CTTCTCTGTG CTTGTCACTC (3) TGTGCTGTTG TTTTTTTTTT (2) 22.6 0.0226 E14.5 retina CTTCTCTGTG CTTGTCACTC (3) GTGCTGAATA (2) TCTCTCCCAC TTTTTTTTTT (2) 40 0.04 E16.5 retina ATGCTCTATT (4) CTTCTCTGTG CTTGTCACTC (3) GTGCTGAATA (2) TGTGCTGTTG TTTTTTTTTT (2) 25.2 0.0252 E18.5 retina ATGCTCTATT (4) CTTGTCACTC (3) GATGGCCTGA TTTTTTTTTT (2) 20 0.02 P0.5 retina ATGCTCTATT (4) TTTTTTTTTT (2) 13.7 0.0137 P2.5 retina ATGCTCTATT (4) CTTCTCTGTG CTTGTCACTC (3) TGTGCTGTTG TTTTTTTTTT (2) 31.6 0.0316 P4.5 retina ATGCTCTATT (4) CTTCTCTGTG CTTGTCACTC (3) TGTGCTGTTG TTTTTTTTTT (2) 29.7 0.0297 P6.5 retina CTTCTCTGTG CTTGTCACTC (3) TGTGCTGTTG TTTTTTTTTT (2) 21.6 0.0216 P10.5 crx- retina CTTCTCTGTG CTTGTCACTC (3) TCTCTCCCAC 22.4 0.0224 P10.5 crx+ retina ATGCTCTATT (4) CTTCTCTGTG CTTGTCACTC (3) TTTTTTTTTT (2) 19.1 0.0191 Adult retinal CTTCTCTGTG CTTGTCACTC (3) TTTTTTTTTT (2) 11.2 0.0112 ONL CTTCTCTGTG GTGCTGAATA (2) TTTTTTTTTT (2) 13.3 0.0133