Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.291880	Tmod2	tropomodulin 2	9	9 38.0 cM	50876
Gene Ontology	actin binding | actin filament organization | cytoskeleton | F-actin capping protein complex | learning and/or memory | nerve-nerve synaptic transmission | positive regulation of G-protein coupled receptor protein signaling pathway | tropomyosin binding
Human Homolog	TMOD2[tropomodulin 2 (neuronal)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 69 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AGAAGTTAGT AGGAACTGTA (2) ATTAAAAATA (2) CCACTGGTCA 13 0.013 Cb medulloblastoma AGAAGTTAGT TGACAAAAAA 9.2 0.0092 P8 GC+1d culture ATTAAAAATA (2) ATTTTAACCA (2) CCACTGGTCA CCCTGCTACT (2) CTGGTGGAAG (2) TGAAAGAAGT 13.6 0.0136 P8 GC+SHH+1d culture AGAAGTTAGT ATTAAAAATA (2) ATTTTAACCA (2) CTGGTGGAAG (2) TGAAAGAAGT TGACAAAAAA 10.5 0.0105 3T3 fibroblasts CTGGTGGAAG (2) GGCAGAAAGA 7 0.007 E15 cortex AGAAGTTAGT TGAAAGAAGT TGGGTTCAGT 14.7 0.0147 P1 cortex AGGAACTGTA (2) ATTAAAAATA (2) CCACTGGTCA CTGGTGGAAG (2) 22.6 0.0226 Hypothalamus ATTAAAAATA (2) CCACTGGTCA CCCTGCTACT (2) CTACCACACC GGCAGAAAGA TGAAAGAAGT 18 0.018 E12.5 retina AGGAACTGTA (2) ATTTTAACCA (2) CTGGTGGAAG (2) 5.7 0.0057 E14.5 retina AGGAACTGTA (2) ATTTTAACCA (2) 5.4 0.0054 E16.5 retina ATTTTAACCA (2) 5.4 0.0054 E18.5 retina AGGAACTGTA (2) CTGGTGGAAG (2) 3.6 0.0036 P0.5 retina ATTTTAACCA (2) GGCAGAAAGA TGAAAGAAGT TGACAAAAAA 8 0.008 P2.5 retina AGAAGTTAGT AGGAACTGTA (2) ATTAAAAATA (2) CTACCACACC TGAAAGAAGT 12.4 0.0124 P4.5 retina ATTAAAAATA (2) ATTTTAACCA (2) CCACTGGTCA CTACCACACC 10 0.01 P6.5 retina AGAAGTTAGT AGGAACTGTA (2) ATTAAAAATA (2) TGGGTTCAGT 10 0.01 P10.5 crx- retina ATTTTAACCA (2) CCACTGGTCA 3.8 0.0038 P10.5 crx+ retina AGGAACTGTA (2) TGGGTTCAGT 5.7 0.0057 Adult retinal AGAAGTTAGT ATTAAAAATA (2) CCCTGCTACT (2) CTACCACACC TGAAAGAAGT 13.1 0.0131 ONL AGGAACTGTA (2) GGCAGAAAGA 13.4 0.0134