Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.292056	Acsl5	acyl-CoA synthetase long-chain family member 5	19		71879
Gene Ontology	catalytic activity | fatty acid metabolism | ligase activity | long-chain-fatty-acid-CoA ligase activity | magnesium ion binding | metabolism | mitochondrion
Human Homolog	ACSL5[acyl-CoA synthetase long-chain family member 5]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 60 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAAAATGTTG (2) AAAATGTTGT (3) CCAGTCAGGT GACTTGGACA TGGTGCCTCT TTTTGTCTTT (2) 21.1 0.0211 Cb medulloblastoma AAAATGTTGT (3) TGGTGCCTCT 6.9 0.0069 P8 GC+1d culture AAAAATGTTG (2) AAAATGTTGT (3) CCAGTCAGGT TGGTGCCTCT 20.5 0.0205 P8 GC+SHH+1d culture AAAAATGTTG (2) TGGTGCCTCT TTTTGTCTTT (2) 25.7 0.0257 3T3 fibroblasts CCAGTCAGGT TGGTGCCTCT 24.5 0.0245 E15 cortex GACTTGGACA 4.9 0.0049 P1 cortex AAAAATGTTG (2) GACTTGGACA 9 0.009 Hypothalamus AAAAATGTTG (2) CCAGTCAGGT 5.4 0.0054 E12.5 retina AAAAATGTTG (2) GACTTGGACA TGGTGCCTCT 16.9 0.0169 E14.5 retina AAAAATGTTG (2) CCAGTCAGGT GACTTGGACA TGGTGCCTCT 18.1 0.0181 E16.5 retina AAAAATGTTG (2) CCAGTCAGGT GACTTGGACA TGGTGCCTCT TTTTGTCTTT (2) 19.9 0.0199 E18.5 retina AAAAATGTTG (2) TCCCTTTGAG TGGTGCCTCT TTTTGTCTTT (2) 18.1 0.0181 P0.5 retina AAAAATGTTG (2) TGGTGCCTCT 5.9 0.0059 P2.5 retina AAAAATGTTG (2) GACTTGGACA TCCCTTTGAG TGGTGCCTCT 24.7 0.0247 P4.5 retina AAAAATGTTG (2) GACTTGGACA TGGTGCCTCT 9.9 0.0099 P6.5 retina AAAAATGTTG (2) AAAATGTTGT (3) TCCCTTTGAG TGGTGCCTCT 16.7 0.0167 P10.5 crx- retina AAAATGTTGT (3) TTTTGTCTTT (2) 3.8 0.0038 P10.5 crx+ retina AAAATGTTGT (3) CCAGTCAGGT TGGTGCCTCT TTTTGTCTTT (2) 9.5 0.0095 Adult retinal GACTTGGACA TTTTGTCTTT (2) 5.6 0.0056 ONL TTTTGTCTTT (2) 1.9 0.0019