| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | CTAGGCAAGC (2) GTATTTAATA (2)
| 8.2 | 0.0082 |
| Cb medulloblastoma | CTAGGCAAGC (2) GTATTTAATA (2) TCTGACAAAG
| 9.2 | 0.0092 |
| P8 GC+1d culture | GTATTTAATA (2)
| 4.6 | 0.0046 |
| P8 GC+SHH+1d culture | GTATTTAATA (2) TAATTTAAAA TCTGACAAAG
| 4.7 | 0.0047 |
| 3T3 fibroblasts | GTATTTAATA (2)
| 3.5 | 0.0035 |
| P1 cortex | GTATTTAATA (2) TCTGACAAAG
| 9 | 0.009 |
| Hypothalamus | CTAGGCAAGC (2) GTATTTAATA (2) TCTGACAAAG
| 5.4 | 0.0054 |
| E12.5 retina | GTATTTAATA (2) TCTGACAAAG
| 3.8 | 0.0038 |
| E14.5 retina | GTATTTAATA (2) TCTGACAAAG
| 10.9 | 0.0109 |
| E16.5 retina | CTAGGCAAGC (2) GTATTTAATA (2) TAATTTAAAA
| 10.8 | 0.0108 |
| E18.5 retina | CTAGGCAAGC (2) GTATTTAATA (2) TCTGACAAAG
| 9 | 0.009 |
| P2.5 retina | CTAGGCAAGC (2) GTATTTAATA (2)
| 8.8 | 0.0088 |
| P4.5 retina | GTATTTAATA (2)
| 9.9 | 0.0099 |
| P6.5 retina | CTAGGCAAGC (2) GTATTTAATA (2) TAATTTAAAA
| 10.1 | 0.0101 |
| P10.5 crx- retina | CTAGGCAAGC (2) GTATTTAATA (2)
| 7.5 | 0.0075 |
| P10.5 crx+ retina | CTAGGCAAGC (2) GTATTTAATA (2) TCTGACAAAG
| 11.5 | 0.0115 |
| Adult retinal | CTAGGCAAGC (2)
| 1.9 | 0.0019 |
| ONL | CTAGGCAAGC (2) GTATTTAATA (2)
| 17.2 | 0.0172 |