Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.292904	Trpc2	transient receptor potential cation channel, subfamily C, member 2	7	7 50.0 cM	22064
Gene Ontology	calcium channel activity | calcium ion transport | cation channel activity | cation transport | cytosolic calcium ion concentration elevation | damaged DNA binding | endoplasmic reticulum membrane | Golgi membrane | integral to membrane | ion channel activity | ion transport | membrane | nuclear membrane | nucleus | receptor activity | single strand break repair | store-operated calcium channel activity
Human Homolog	TRPC2[transient receptor potential cation channel, subfamily C, member 2]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 108 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC ATTCCGAATT (2) CAATAAACCA CCTTTAATCC (3) GCTTGTAAGG GTGGCGCACA 66.9 0.0669 Cb medulloblastoma CCTTTAATCC (3) GAAAGAGGGA GGGGGGGGGG 50.8 0.0508 P8 GC+1d culture CCTTTAATCC (3) GAAAGAGGGA GGGGGGGGGG GGGTGGCTTA GTGGCGCACA TGTGCGTGTC (3) 43.3 0.0433 P8 GC+SHH+1d culture CCTTTAATCC (3) GAAAGAGGGA GGGGGGGGGG GTGGCGCACA TGTGCGTGTC (3) 38.7 0.0387 3T3 fibroblasts CCAGCGTGTG (2) CCTTTAATCC (3) GGGGGGGGGG GTGGCGCACA TGTGCGTGTC (3) 108.6 0.1086 E15 cortex CCTTTAATCC (3) GAAAGAGGGA GGGGGGGGGG GTGGCGCACA TGTGCGTGTC (3) 113.6 0.1136 P1 cortex CCTTTAATCC (3) GTGGCGCACA 159 0.159 Hypothalamus CCTTTAATCC (3) GAAAGAGGGA GGGGGGGGGG GTGGCGCACA 32.5 0.0325 E12.5 retina CAATAAACCA CCTTTAATCC (3) GAAAGAGGGA GTGGCGCACA 90.2 0.0902 E14.5 retina CCTTTAATCC (3) GAAAGAGGGA GCTTGTAAGG GTGCTTTTTA (2) GTGGCGCACA 136.6 0.1366 E16.5 retina CAATAAACCA CCTTTAATCC (3) GAAAGAGGGA GTGCTTTTTA (2) GTGGCGCACA TGTGCGTGTC (3) 94.1 0.0941 E18.5 retina CAATAAACCA CCAGCGTGTG (2) CCTTTAATCC (3) GAAAGAGGGA GTGCTTTTTA (2) GTGGCGCACA TGTGCGTGTC (3) 45.4 0.0454 P0.5 retina CAATAAACCA CCAGCGTGTG (2) CCTTTAATCC (3) GAAAGAGGGA GCTTGTAAGG GTGGCGCACA 86.5 0.0865 P2.5 retina CAATAAACCA CCTTTAATCC (3) GAAAGAGGGA GCTTGTAAGG GGGGGGGGGG GTGGCGCACA 95 0.095 P4.5 retina ATTCCGAATT (2) CAATAAACCA CCTTTAATCC (3) GAAAGAGGGA GCTTGTAAGG GGGGGGGGGG GTGGCGCACA TGTGCGTGTC (3) 79.3 0.0793 P6.5 retina ATTCCGAATT (2) CAATAAACCA CCTTTAATCC (3) GAAAGAGGGA GCTTGTAAGG GGGGGGGGGG GTGGCGCACA 95 0.095 P10.5 crx- retina CAATAAACCA CCTTTAATCC (3) GAAAGAGGGA GCTTGTAAGG GTGGCGCACA TGTGCGTGTC (3) 80 0.08 P10.5 crx+ retina CAATAAACCA CCTTTAATCC (3) GAAAGAGGGA GGGGGGGGGG GGGTGGCTTA GTGGCGCACA TGTGCGTGTC (3) 72.9 0.0729 Adult retinal CCTTTAATCC (3) GAAAGAGGGA GGGGGGGGGG GTGGCGCACA 157.4 0.1574 ONL ATTCCGAATT (2) CCTTTAATCC (3) GAAAGAGGGA GGGGGGGGGG GTGCTTTTTA (2) GTGGCGCACA TGTGCGTGTC (3) 111 0.111