| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | AACAGTTGAC CCATTTGAGC (2) TATTAAATGT (2) TGGTTGCTGG TGTAAATGTG
| 89.7 | 0.0897 |
| Cb medulloblastoma | TATTAAATGT (2) TGGTTGCTGG TGTAAATGTG
| 143.3 | 0.1433 |
| P8 GC+1d culture | CCATTTGAGC (2) GATTGCTTTT TATTAAATGT (2) TGGTTGCTGG
| 78.8 | 0.0788 |
| P8 GC+SHH+1d culture | CCATTTGAGC (2) GATTGCTTTT TATTAAATGT (2) TGGTTGCTGG TGTAAATGTG
| 109 | 0.109 |
| 3T3 fibroblasts | CCATTTGAGC (2) GCCTCTGGCA (2) TGGTTGCTGG
| 231.3 | 0.2313 |
| E15 cortex | CCATTTGAGC (2) TATTAAATGT (2) TGGTTGCTGG
| 291.9 | 0.2919 |
| P1 cortex | CCATTTGAGC (2) TGGTTGCTGG
| 109.1 | 0.1091 |
| Hypothalamus | TATTAAATGT (2) TGGTTGCTGG
| 380.4 | 0.3804 |
| E12.5 retina | CCATTTGAGC (2) GATTGCTTTT TGGTTGCTGG
| 165.2 | 0.1652 |
| E14.5 retina | TGGTTGCTGG
| 936.5 | 0.9365 |
| E16.5 retina | CCATTTGAGC (2) TATTAAATGT (2) TGGTTGCTGG
| 775.1 | 0.7751 |
| E18.5 retina | CCATTTGAGC (2) TATTAAATGT (2) TGGTTGCTGG TGTAAATGTG
| 274.7 | 0.2747 |
| P0.5 retina | CCATTTGAGC (2) GATTGCTTTT TATTAAATGT (2) TGGTTGCTGG
| 204.1 | 0.2041 |
| P2.5 retina | TATTAAATGT (2) TATTAATGTA (2) TGGTTGCTGG TGTAAATGTG
| 179.5 | 0.1795 |
| P4.5 retina | AACAGTTGAC CCATTTGAGC (2) GCCTCTGGCA (2) TATTAAATGT (2) TGGTTGCTGG TGTAAATGTG
| 168.5 | 0.1685 |
| P6.5 retina | CCATTTGAGC (2) GATTGCTTTT TATTAAATGT (2) TGGTTGCTGG TGTAAATGTG
| 181.7 | 0.1817 |
| P10.5 crx- retina | CCATTTGAGC (2) TATTAAATGT (2) TATTAATGTA (2) TGGTTGCTGG
| 293.5 | 0.2935 |
| P10.5 crx+ retina | AACAGTTGAC CCATTTGAGC (2) TATTAAATGT (2) TGGTTGCTGG
| 109.5 | 0.1095 |
| Adult retinal | CCATTTGAGC (2) TATTAAATGT (2) TGGTTGCTGG
| 220.4 | 0.2204 |
| ONL | CCATTTGAGC (2) TATTAAATGT (2) TGGTTGCTGG
| 404.1 | 0.4041 |