Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.293233	Acat1	acetyl-Coenzyme A acetyltransferase 1	9	9 30.0 cM	110446
Gene Ontology	acetyl-CoA C-acetyltransferase activity | acyltransferase activity | mitochondrion | mitochondrion | transferase activity
Human Homolog	ACAT1[acetyl-Coenzyme A acetyltransferase 1 (acetoacetyl Coenzyme A thiolase)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 98 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CCCTGAAGCC (2) GACTTCTATT TCAGGCTGCC TGACCGGCTG TGGGAAGTAA 133.8 0.1338 Cb medulloblastoma CCCTGAAGCC (2) GCTGCCCTGG (2) TCAGGCTGCC TGACCGGCTG TGGGAAGTAA 356 0.356 P8 GC+1d culture AGCCATATGA CCCTGAAGCC (2) GACTTCTATT GCTGCCCTGG (2) TCAGGCTGCC TGACCGGCTG 211.2 0.2112 P8 GC+SHH+1d culture GAACTGTCTC (2) GACTTCTATT GCTGCCCTGG (2) GCTTTAATCC TCAGGCTGCC TGACCGGCTG 256.5 0.2565 3T3 fibroblasts GCTGCCCTGG (2) TCAGGCTGCC TGACCGGCTG 368 0.368 E15 cortex GCTGCCCTGG (2) TCAGGCTGCC TGACCGGCTG 98.9 0.0989 P1 cortex CCCTGAGCCA GCTTTAATCC TCAGGCTGCC TGGGGAAGTA (2) 68 0.068 Hypothalamus GCTGCCCTGG (2) TCAGGCTGCC TGACCGGCTG TGGGAAGTAA 503.5 0.5035 E12.5 retina GACTTCTATT TCAGGCTGCC TGACCGGCTG 88.3 0.0883 E14.5 retina CTGAGAGAAG (2) GACTTCTATT GATGTTAGAT GCTGCCCTGG (2) GCTTTAATCC TCAGGCTGCC TCTCTGTTTC 96.4 0.0964 E16.5 retina GATGTTAGAT GCTGCCCTGG (2) TCAGGCTGCC TGACCGGCTG 112.2 0.1122 E18.5 retina GAACTGTCTC (2) GACTTCTATT TCAGGCTGCC TGACCGGCTG 83.6 0.0836 P0.5 retina CCCTGAGCCA CTGAGAGAAG (2) GACTTCTATT GCTTTAATCC TCAGGCTGCC TGACCGGCTG 80.6 0.0806 P2.5 retina CTGAGAGAAG (2) GACTTCTATT GCTGCCCTGG (2) GCTTTAATCC TCAGGCTGCC TGACCGGCTG 98.5 0.0985 P4.5 retina GAACTGTCTC (2) GATGTTAGAT GCTTTAATCC TCAGGCTGCC TGACCGGCTG 113 0.113 P6.5 retina GAACTGTCTC (2) GCTTTAATCC TCAGGCTGCC TCTCTGTTTC TGACCGGCTG TGGGGAAGTA (2) 148.5 0.1485 P10.5 crx- retina TCAGGCTGCC TGACCGGCTG TGGGAAGTAA 163.5 0.1635 P10.5 crx+ retina CCCTGAAGCC (2) GACTTCTATT GCTTTAATCC TCAGGCTGCC TGACCGGCTG TGGGAAGTAA 240.2 0.2402 Adult retinal GACTTCTATT GCTGCCCTGG (2) GCTTTAATCC TCAGGCTGCC TGACCGGCTG TGGGAAGTAA 96.4 0.0964 ONL AGCCATATGA GACTTCTATT GCTTTAATCC TCAGGCTGCC TGACCGGCTG TGGGGAAGTA (2) 95.7 0.0957