Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.293716	Nipsnap1	4-nitrophenylphosphatase domain and non-neuronal SNAP25-like protein homolog 1 (C. elegans)	11	4 23.1 cM	18082
Gene Ontology	biological_process unknown | mitochondrion | molecular_function unknown
Human Homolog	NIPSNAP1[nipsnap homolog 1 (C. elegans)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 52 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GTTGTGCTAC 6.5 0.0065 Cb medulloblastoma ACTGGCTGTT GTTGTGCTAC 9.2 0.0092 P8 GC+1d culture ACTGGCTGTT GTTGGTGCTA GTTGTGCTAC TCTACTACAG 14.8 0.0148 P8 GC+SHH+1d culture ACTGGCTGTT GAAACGCCTC GTTGGTGCTA GTTGTGCTAC TCTACTACAG 15.2 0.0152 3T3 fibroblasts ACTGGCTGTT GTTGGTGCTA TCTACTACAG 10.5 0.0105 E15 cortex ACTGGCTGTT 4.9 0.0049 P1 cortex ACTGGCTGTT 4.5 0.0045 Hypothalamus ACTGGCTGTT GTTGTGCTAC TCTACTACAG 7.2 0.0072 E12.5 retina ACTGGCTGTT GTTGTGCTAC TCTACTACAG 16.9 0.0169 E14.5 retina TCTACTACAG 1.8 0.0018 E16.5 retina ACTGGCTGTT GTTGGTGCTA GTTGTGCTAC TCTACTACAG 10.8 0.0108 E18.5 retina ACTGGCTGTT GAAACGCCTC GTTGTGCTAC 7.2 0.0072 P0.5 retina GTTGTGCTAC TCTACTACAG 9.9 0.0099 P2.5 retina ACTGGCTGTT GTTGGTGCTA GTTGTGCTAC TCTACTACAG 15.9 0.0159 P4.5 retina GTTGTGCTAC TCTACTACAG 13.8 0.0138 P6.5 retina ACTGGCTGTT GTTGTGCTAC TCTACTACAG 13.3 0.0133 P10.5 crx- retina ACTGGCTGTT GTTGGTGCTA TCTACTACAG 7.5 0.0075 P10.5 crx+ retina ACTGGCTGTT GTTGTGCTAC TCTACTACAG 11.5 0.0115 Adult retinal ACTGGCTGTT TCTACTACAG 3.8 0.0038 ONL GTTGTGCTAC TCTACTACAG 7.6 0.0076