Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.29385
Ppp1r10
protein phosphatase 1, regulatory subunit 10
17
17 B1 (17 20.5 cM)
52040
Mm.29385
2810427A07Rik
RIKEN cDNA 2810427A07 gene
17
72767
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 25 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
GGGGAGGCGG
1.6
0.0016
Cb medulloblastoma
AAAACACACA (
3
)
4.6
0.0046
P8 GC+1d culture
AGGAGCCCTG
(
2
)
2.3
0.0023
P8 GC+SHH+1d culture
AGGAGCCCTG
(
2
)
3.5
0.0035
3T3 fibroblasts
AGGAGCCCTG
(
2
)
GCACACTGCA
7
0.007
P1 cortex
AGGAGCCCTG
(
2
)
9.1
0.0091
Hypothalamus
GATGCAGCCT
(
2
)
GCACACTGCA
3.6
0.0036
E12.5 retina
AGGAGCCCTG
(
2
)
GGGGAGGCGG
5.7
0.0057
E14.5 retina
AGGAGCCCTG
(
2
)
3.6
0.0036
E16.5 retina
AAAACACACA (
3
)
ATTACGCCAA
GATGCAGCCT
(
2
)
5.4
0.0054
E18.5 retina
AGGAGCCCTG
(
2
)
1.8
0.0018
P0.5 retina
ATTACGCCAA
2
0.002
P4.5 retina
GATGCAGCCT
(
2
)
2
0.002
P6.5 retina
GCACACTGCA
GGGGAGGCGG
3.4
0.0034
P10.5 crx- retina
AGGAGCCCTG
(
2
)
3.7
0.0037
P10.5 crx+ retina
AGGAGCCCTG
(
2
)
3.8
0.0038
Adult retinal
AGGAGCCCTG
(
2
)
ATTACGCCAA
11.1
0.0111
ONL
GCACACTGCA
1.9
0.0019
