Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.294138	Ppp2r1a	protein phosphatase 2 (formerly 2A), regulatory subunit A (PR 65), alpha isoform	17		51792
Gene Ontology	cytosol | phosphoprotein phosphatase activity | protein binding
Human Homolog	PPP2R1A[protein phosphatase 2 (formerly 2A), regulatory subunit A (PR 65), alpha isoform]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 122 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AACTCTGCCT (2) ATTATGTGCA (4) CACAGGCAGT (2) GTGTGAAATA TGCATTTATT TTTTTGGTGT TTTTTTGTGT 60.4 0.0604 Cb medulloblastoma AGCAACTCAA ATTATGTGCA (4) GTGTGAAATA TGTTTGTGTG (2) TTTGGTGTGT (2) TTTTTGGTGT TTTTTTGTGT 62.4 0.0624 P8 GC+1d culture AGCAACTCAA CACAGGGAGT GTCTGACCCC GTGTGAAATA TGCATTTATT TGTGAATATT (2) TTTTTGGTGT TTTTTTGTGT 63.7 0.0637 P8 GC+SHH+1d culture ATTATGTGCA (4) GTCTGACCCC GTGTGAAATA TGCATTTATT TGTGAATATT (2) TTTTTGGTGT TTTTTGTGTG (2) TTTTTTGTGT TTTTTTTGTG (2) 77.2 0.0772 3T3 fibroblasts AACTCTGCCT (2) GTTGGGGTTG TTTTTGGTGT TTTTTTGTGT 14 0.014 P1 cortex TTTTTGGTGT TTTTTTGTGT 59.1 0.0591 Hypothalamus ATTATGTGCA (4) CTGCCCACAG (3) GTTGGGGTTG TCAGAGTGAG (3) TGTTTGTGTG (2) TTTGGTGTGT (2) TTTTTGGTGT TTTTTTGTGT 70.6 0.0706 E12.5 retina AACTCTGCCT (2) ATTATGTGCA (4) CACAGGCAGT (2) GGGAGGGGGC (2) GTGTGAAATA TTTTTGGTGT TTTTTTGTGT 77.1 0.0771 E14.5 retina GTGTGAAATA GTTGGGGTTG TGTGAATATT (2) TGTTTGTGTG (2) TTTGGTGTGT (2) TTTTTGGTGT TTTTTTGTGT 80 0.08 E16.5 retina AACTCTGCCT (2) CTGCCCACAG (3) GTGTGAAATA GTTGGGGTTG TGTGAATATT (2) TTTTTGGTGT TTTTTTGTGT 74.2 0.0742 E18.5 retina AGCAACTCAA GTGTGAAATA TTTTTGGTGT TTTTTTGTGT 52.7 0.0527 P0.5 retina AACTCTGCCT (2) ATTATGTGCA (4) CACAGGGAGT TTTGGTGTGT (2) TTTTTGGTGT TTTTTGTGTG (2) TTTTTTGTGT TTTTTTTGTG (2) 59 0.059 P2.5 retina AACTCTGCCT (2) GGGAGGGGGC (2) GTGTGAAATA TGTTTGTGTG (2) TTTTTGGTGT TTTTTTGTGT 74 0.074 P4.5 retina ATTATGTGCA (4) GGGAGGGGGC (2) GTGTGAAATA TCAGAGTGAG (3) TGTGAATATT (2) TGTTTGTGTG (2) TTTTTGGTGT TTTTTTGTGT 93.2 0.0932 P6.5 retina GTGTGAAATA TCAGAGTGAG (3) TGTTTGTGTG (2) TTTTTGGTGT TTTTTGTGTG (2) TTTTTTGTGT 81.8 0.0818 P10.5 crx- retina CACAGGGAGT CTGCCCACAG (3) TGCATTTATT TGTGAATATT (2) TTTTTGGTGT TTTTTTGTGT 76.3 0.0763 P10.5 crx+ retina CACAGGCAGT (2) GTGTGAAATA GTTGGGGTTG TGTGAATATT (2) TTTGGTGTGT (2) TTTTTGGTGT TTTTTTGTGT TTTTTTTGTG (2) 65.2 0.0652 Adult retinal GTGTGAAATA TTTGGTGTGT (2) TTTTTGGTGT TTTTTTGTGT 53.8 0.0538 ONL GGGAGGGGGC (2) GTGTGAAATA GTTGGGGTTG TTTTTGGTGT TTTTTTGTGT TTTTTTTGTG (2) 32.5 0.0325