| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | AAAAGAAATA (2) ACAGAAGATG (2) TATTTAATTT
| 19.6 | 0.0196 |
| Cb medulloblastoma | AAAAGAAATA (2) AAGAAGATGG CCTAAGTAAG GAAAGAAAGC (2)
| 48.5 | 0.0485 |
| P8 GC+1d culture | AAAAGAAATA (2) AAGAAGATGG ACAGAAGATG (2) TATTTAATTT
| 19.4 | 0.0194 |
| P8 GC+SHH+1d culture | AAAAGAAATA (2) AAGAAGATGG CCTAAGTAAG GAAAGAAAGC (2) TATTTAATTT
| 22.2 | 0.0222 |
| 3T3 fibroblasts | AAGAAGATGG
| 3.5 | 0.0035 |
| E15 cortex | GAAAGAAAGC (2)
| 4.9 | 0.0049 |
| P1 cortex | AAAAGAAATA (2) GAAAGAAAGC (2)
| 9 | 0.009 |
| Hypothalamus | AAAAGAAATA (2) TATTTAATTT
| 27.2 | 0.0272 |
| E12.5 retina | AAAAGAAATA (2) AAGAAGATGG GAAAGAAAGC (2)
| 11.3 | 0.0113 |
| E14.5 retina | AAAAGAAATA (2) GAAAGAAAGC (2) TATTTAATTT
| 30.9 | 0.0309 |
| E16.5 retina | AAAAGAAATA (2) TATTTAATTT
| 25.3 | 0.0253 |
| E18.5 retina | AAAAGAAATA (2) GAAAGAAAGC (2) TATTTAATTT
| 36.4 | 0.0364 |
| P0.5 retina | AAAAGAAATA (2)
| 2 | 0.002 |
| P2.5 retina | AAAAGAAATA (2) GAAAGAAAGC (2) TATTTAATTT
| 17.7 | 0.0177 |
| P4.5 retina | AAAAGAAATA (2) AAGAAGATGG TATTTAATTT
| 19.9 | 0.0199 |
| P6.5 retina | AAAAGAAATA (2) GAAAGAAAGC (2)
| 31.7 | 0.0317 |
| P10.5 crx- retina | AAAAGAAATA (2) AAGAAGATGG CCTAAGTAAG GAAAGAAAGC (2) TATTTAATTT
| 24.2 | 0.0242 |
| P10.5 crx+ retina | AAAAGAAATA (2) AAGAAGATGG GAAAGAAAGC (2)
| 13.5 | 0.0135 |
| Adult retinal | AAGAAGATGG GAAAGAAAGC (2) TATTTAATTT
| 16.7 | 0.0167 |
| ONL | AAAAGAAATA (2) ACAGAAGATG (2) GAAAGAAAGC (2) TATTTAATTT
| 26.8 | 0.0268 |