| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | TAGCCCAGGC (2) TGAAAAAAAA (2)
| 29.3 | 0.0293 |
| Cb medulloblastoma | TAGCCCAGGC (2) TGAAAAAAAA (2)
| 83.2 | 0.0832 |
| P8 GC+1d culture | AGGTTGAGGG (2) TAGCCCAGGC (2) TGAAAAAAAA (2) TGAGGCCTTG
| 30.8 | 0.0308 |
| P8 GC+SHH+1d culture | TAGCCCAGGC (2) TGAAAAAAAA (2)
| 65.6 | 0.0656 |
| 3T3 fibroblasts | TAGCCCAGGC (2) TGAAAAAAAA (2)
| 21 | 0.021 |
| E15 cortex | TAGCCCAGGC (2) TGAAAAAAAA (2)
| 54.4 | 0.0544 |
| P1 cortex | TGAAAAAAAA (2)
| 4.5 | 0.0045 |
| Hypothalamus | TAGCCCAGGC (2) TGAAAAAAAA (2)
| 43.4 | 0.0434 |
| E12.5 retina | TAGCCCAGGC (2) TGAAAAAAAA (2)
| 39.4 | 0.0394 |
| E14.5 retina | TAGCCCAGGC (2) TGAAAAAAAA (2)
| 62 | 0.062 |
| E16.5 retina | AGGTTGAGGG (2) TAGCCCAGGC (2) TGAAAAAAAA (2)
| 27.1 | 0.0271 |
| E18.5 retina | TAGCCCAGGC (2) TGAAAAAAAA (2)
| 81.9 | 0.0819 |
| P0.5 retina | AGGTTGAGGG (2) TAGCCCAGGC (2) TGAAAAAAAA (2) TGAGGCCTTG
| 31.4 | 0.0314 |
| P2.5 retina | AGGTTGAGGG (2) TAGCCCAGGC (2) TGAAAAAAAA (2)
| 54.5 | 0.0545 |
| P4.5 retina | TAGCCCAGGC (2) TGAAAAAAAA (2)
| 45.6 | 0.0456 |
| P6.5 retina | TAGCCCAGGC (2) TGAAAAAAAA (2)
| 38.3 | 0.0383 |
| P10.5 crx- retina | TAGCCCAGGC (2) TGAAAAAAAA (2)
| 11.2 | 0.0112 |
| P10.5 crx+ retina | TAGCCCAGGC (2) TGAAAAAAAA (2)
| 23 | 0.023 |
| Adult retinal | AGGTTGAGGG (2) TAGCCCAGGC (2) TGAAAAAAAA (2)
| 16.8 | 0.0168 |
| ONL | TAGCCCAGGC (2) TGAAAAAAAA (2) TGAGGCCTTG
| 30.7 | 0.0307 |