Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.29473	Copz1	coatomer protein complex, subunit zeta 1	15	15 6.0 cM	56447
Gene Ontology	clathrin vesicle coat | COPI vesicle coat | COPI-coated vesicle | Golgi apparatus | intracellular protein transport | membrane | protein transport | protein transporter activity | transport
Human Homolog	COPZ1[coatomer protein complex, subunit zeta 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 58 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC ATGGCGGAGG CACTGGCTGA 13.1 0.0131 Cb medulloblastoma CACTGGCTGA GGCCAGAATG (2) 6.9 0.0069 P8 GC+1d culture ATGGCGGAGG CACTGGCTGA CACTGGGCTG 20.5 0.0205 P8 GC+SHH+1d culture ATGGCGGAGG CACTGGCTGA GGCCAGAATG (2) 18.7 0.0187 3T3 fibroblasts CACTGGCTGA 7 0.007 E15 cortex CACTGGCTGA 19.8 0.0198 P1 cortex CACTGGCTGA 9.1 0.0091 Hypothalamus CACTGGCTGA CACTGGGCTG GGGCAGAATG 9 0.009 E12.5 retina ATGGCGGAGG CACTGGCTGA CACTGGGCTG 28.1 0.0281 E14.5 retina ATGGCGGAGG CACTGGCTGA GCATACTGTT 14.5 0.0145 E16.5 retina ATGGCGGAGG CACTGGCTGA CACTGGGCTG GCATACTGTT GGCCAGAATG (2) 19.9 0.0199 E18.5 retina ATGGCGGAGG CACTGGCTGA CACTGGGCTG GGCCAGAATG (2) GGGCAGAATG 23.6 0.0236 P0.5 retina ATGGCGGAGG CACTGGCTGA 33.3 0.0333 P2.5 retina ATGGCGGAGG CACTGGCTGA CCCTGGCTGA (2) 14.2 0.0142 P4.5 retina ATGGCGGAGG CACTGGCTGA CACTGGGCTG GGCCAGAATG (2) 23.9 0.0239 P6.5 retina ATGGCGGAGG CACTGGCTGA CACTGGGCTG GCATACTGTT GGCCAGAATG (2) GGGCAGAATG 21.8 0.0218 P10.5 crx- retina ATGGCGGAGG CACTGGCTGA 22.3 0.0223 P10.5 crx+ retina ATGGCGGAGG CACTGGCTGA GGGCAGAATG 21.1 0.0211 Adult retinal CACTGGCTGA CACTGGGCTG CCCTGGCTGA (2) 20.4 0.0204 ONL ATGGCGGAGG CACTGGCTGA CACTGGGCTG 5.7 0.0057