| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | CCTTTAATCC (3) GGAAAATATG GGCTTCGGTC
| 474.7 | 0.4747 |
| Cb medulloblastoma | CCTTTAATCC (3) GGCTTCGGTC TATGTACATA (2)
| 161.8 | 0.1618 |
| P8 GC+1d culture | ACACTACCAG CCTTTAATCC (3) GGCTTCGGTC
| 266 | 0.266 |
| P8 GC+SHH+1d culture | CCTTTAATCC (3) GGAAAATATG GGCTTCGGTC
| 324.4 | 0.3244 |
| 3T3 fibroblasts | CCTTTAATCC (3) GGCTTCGGTC
| 613.4 | 0.6134 |
| E15 cortex | CCTTTAATCC (3) GGCTTCGGTC
| 242.4 | 0.2424 |
| P1 cortex | CCTTTAATCC (3) GGCTTCGGTC GGTGTGTGGG (5)
| 286.3 | 0.2863 |
| Hypothalamus | CCTTTAATCC (3) GGAAAATATG GGCTTCGGTC GGTGTGTGGG (5) TATGTACATA (2)
| 356.7 | 0.3567 |
| E12.5 retina | ACACTACCAG CCTTTAATCC (3) GGAAAATATG GGCTTCGGTC TATGTACATA (2)
| 627.1 | 0.6271 |
| E14.5 retina | ACACTACCAG CCTTTAATCC (3) GGAAAATATG GGCTTCGGTC
| 455.5 | 0.4555 |
| E16.5 retina | ACACTACCAG CCTTTAATCC (3) GGAAAATATG GGCTTCGGTC GGTGTGTGGG (5) TATGTACATA (2)
| 469.1 | 0.4691 |
| E18.5 retina | ACACTACCAG CCTTTAATCC (3) GGAAAATATG GGCTTCGGTC
| 494.7 | 0.4947 |
| P0.5 retina | ACACTACCAG CCTTTAATCC (3) GGCTTCGGTC
| 368.9 | 0.3689 |
| P2.5 retina | ACACTACCAG CCTTTAATCC (3) GGAAAATATG GGCTTCGGTC TATGTACATA (2)
| 376.6 | 0.3766 |
| P4.5 retina | CCTTTAATCC (3) GGAAAATATG GGCTTCGGTC GGTGTGTGGG (5)
| 360.6 | 0.3606 |
| P6.5 retina | ACACTACCAG CCTTTAATCC (3) GGAAAATATG GGCTTCGGTC TATGTACATA (2)
| 298.5 | 0.2985 |
| P10.5 crx- retina | CCTTTAATCC (3) GGAAAATATG GGCTTCGGTC
| 68.8 | 0.0688 |
| P10.5 crx+ retina | CCTTTAATCC (3) GGAAAATATG GGCTTCGGTC GGTGTGTGGG (5) TATGTACATA (2)
| 49.9 | 0.0499 |
| Adult retinal | CCTTTAATCC (3) GGCTTCGGTC
| 272.2 | 0.2722 |
| ONL | CCTTTAATCC (3) GGCTTCGGTC TATGTACATA (2)
| 180.1 | 0.1801 |