Mouse Retina SAGE Library

[Home]    [Libraries]    [Images]

---

Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

---

UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.294753	Litaf	LPS-induced TN factor	16	16 A1	56722
Gene Ontology	biological_process unknown | cellular_component unknown | protein binding
Human Homolog	LITAF[lipopolysaccharide-induced TNF factor]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

Total 5 In Situ Hybridization Images

Images -- Click to Enlarge

SAGE Tags

Total 78 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC ACTTTGATAT ATTTCAGTTT CAAACTTCTG GCTCTCCAGC (2) TTACCCCACT (2) 65.2 0.0652 Cb medulloblastoma CAAACTTCTG GCTCTCCAGC (2) GTGCAGTTAA 182.7 0.1827 P8 GC+1d culture ACTTTGATAT AGCAGCGTCT CAAACTTCTG CCTTGGAAAG (3) GCTCTCCAGC (2) GTCTCCCACA TTACCCCACT (2) 96.9 0.0969 P8 GC+SHH+1d culture ACTTTGATAT CAAACTTCTG GCTCTCCAGC (2) TGGAGCTTTG (2) 86.7 0.0867 3T3 fibroblasts ACTTTGATAT GCTCTCCAGC (2) 31.5 0.0315 E15 cortex ACTTTGATAT CAAACTTCTG GCTCTCCAGC (2) 79.1 0.0791 P1 cortex CAAACTTCTG GCTCTCCAGC (2) TGGAGCTTTG (2) 68.1 0.0681 Hypothalamus ACTTTGATAT CAAACTTCTG GCTCTCCAGC (2) 86.9 0.0869 E12.5 retina ACTTTGATAT CAAACTTCTG CCTTGGAAAG (3) GCTCTCCAGC (2) 60.2 0.0602 E14.5 retina ACTTTGATAT ATTTCAGTTT CAAACTTCTG CCTTGGAAAG (3) GCTCTCCAGC (2) 92.9 0.0929 E16.5 retina CAAACTTCTG CCTTGGAAAG (3) GCTCTCCAGC (2) 106.8 0.1068 E18.5 retina ACTTTGATAT CAAACTTCTG CCTTGGAAAG (3) GCTCTCCAGC (2) 143.6 0.1436 P0.5 retina ACTTTGATAT CAAACTTCTG GCTCTCCAGC (2) GTCTCCCACA GTGCAGTTAA TGGAGCTTTG (2) 80.6 0.0806 P2.5 retina CAAACTTCTG CCTTGGAAAG (3) GCTCTCCAGC (2) TGGAGCTTTG (2) 86.3 0.0863 P4.5 retina ACTTTGATAT CCTTGGAAAG (3) GCTCTCCAGC (2) 69.4 0.0694 P6.5 retina CAAACTTCTG CCTTGGAAAG (3) GCTCTCCAGC (2) GTCTCCCACA 90 0.09 P10.5 crx- retina CAAACTTCTG GCTCTCCAGC (2) TGGAGCTTTG (2) 63.2 0.0632 P10.5 crx+ retina ACTTTGATAT CAAACTTCTG GCTCTCCAGC (2) GTGCAGTTAA 105.7 0.1057 Adult retinal ACTTTGATAT AGCAGCGTCT CAAACTTCTG GCTCTCCAGC (2) GTCTCCCACA TTACCCCACT (2) 74.1 0.0741 ONL CAAACTTCTG GCTCTCCAGC (2) 38.3 0.0383