Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.2948
H2-Ke2
H2-K region expressed gene 2
17
17 18.41 cM
14976
Gene Ontology
chaperone activity
|
nucleus
Human Homolog
HKE2[HLA class II region expressed gene KE2]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 39 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
CCTTTAATCC (
3
)
GCTGAACTGA
55.5
0.0555
Cb medulloblastoma
CCTTTAATCC (
3
)
41.6
0.0416
P8 GC+1d culture
CCTTTAATCC (
3
)
GCTGAACTGA
35.4
0.0354
P8 GC+SHH+1d culture
CCTTTAATCC (
3
)
GCTGAACTGA
28.1
0.0281
3T3 fibroblasts
CCTTTAATCC (
3
)
70.1
0.0701
E15 cortex
CCTTTAATCC (
3
)
GAAAACCTGC
GCTGAACTGA
69.2
0.0692
P1 cortex
CCTTTAATCC (
3
)
GCTGAACTGA
159
0.159
Hypothalamus
CCTTTAATCC (
3
)
GCTGAACTGA
21.7
0.0217
E12.5 retina
CCTTTAATCC (
3
)
GCTGAACTGA
77
0.077
E14.5 retina
CCTTTAATCC (
3
)
120.3
0.1203
E16.5 retina
CCTTTAATCC (
3
)
68.8
0.0688
E18.5 retina
CCTTTAATCC (
3
)
GCTGAACTGA
25.4
0.0254
P0.5 retina
CCTTTAATCC (
3
)
GCTGAACTGA
76.5
0.0765
P2.5 retina
AGGACTTTAA
CCTTTAATCC (
3
)
72.2
0.0722
P4.5 retina
CCTTTAATCC (
3
)
GAAAACCTGC
GCTGAACTGA
49.6
0.0496
P6.5 retina
CCTTTAATCC (
3
)
GCTGAACTGA
71.7
0.0717
P10.5 crx- retina
CCTTTAATCC (
3
)
63.2
0.0632
P10.5 crx+ retina
AGGACTTTAA
CCTTTAATCC (
3
)
GCTGAACTGA
44.1
0.0441
Adult retinal
CCTTTAATCC (
3
)
GAAAACCTGC
GCTGAACTGA
138.9
0.1389
ONL
CCTTTAATCC (
3
)
GCTGAACTGA
88.1
0.0881
