| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | AAGAGGCGAC CTATGGGCTG CTGGCCATCC (2) GACCAAAAAA GTGCTGGAGA (3)
| 14.7 | 0.0147 |
| Cb medulloblastoma | ACATCCCAGG GACCAAAAAA
| 9.2 | 0.0092 |
| P8 GC+1d culture | ACATCCCAGG CTATGGGCTG GACCAAAAAA GCTGCCCACC GTGCTGGAGA (3)
| 11.3 | 0.0113 |
| P8 GC+SHH+1d culture | CTATGGGCTG GACCAAAAAA
| 7 | 0.007 |
| 3T3 fibroblasts | CTATGGGCTG
| 7 | 0.007 |
| E15 cortex | CTATGGGCTG GCTGCCCACC GTGCTGGAGA (3)
| 19.7 | 0.0197 |
| Hypothalamus | GACCAAAAAA
| 3.6 | 0.0036 |
| E12.5 retina | CTATGGGCTG
| 1.9 | 0.0019 |
| E14.5 retina | CTATGGGCTG GACCAAAAAA GCTGCCCACC GTGCTGGAGA (3) TTTCTTTCTC (2)
| 10.8 | 0.0108 |
| E16.5 retina | CTATGGGCTG CTGGCCATCC (2) GACCAAAAAA
| 7.2 | 0.0072 |
| E18.5 retina | CTATGGGCTG GACCAAAAAA
| 9.1 | 0.0091 |
| P0.5 retina | AAGAGGCGAC CTATGGGCTG GCTGCCCACC
| 6 | 0.006 |
| P2.5 retina | GACCAAAAAA GCTGCCCACC GTGCTGGAGA (3)
| 7.1 | 0.0071 |
| P4.5 retina | CTATGGGCTG GACCAAAAAA GTGCTGGAGA (3)
| 8 | 0.008 |
| P6.5 retina | CTATGGGCTG GACCAAAAAA
| 15 | 0.015 |
| P10.5 crx- retina | CTATGGGCTG GTGCTGGAGA (3)
| 11.2 | 0.0112 |
| P10.5 crx+ retina | ACATCCCAGG GACCAAAAAA
| 9.6 | 0.0096 |
| Adult retinal | AAGAGGCGAC CTATGGGCTG CTGGCCATCC (2) GACCAAAAAA GTGCTGGAGA (3) TTTCTTTCTC (2)
| 20.6 | 0.0206 |
| ONL | GACCAAAAAA GTGCTGGAGA (3) TTTCTTTCTC (2)
| 13.3 | 0.0133 |