Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.29561	Ctsf	cathepsin F	19		56464
Gene Ontology	cysteine-type endopeptidase activity | cysteine-type peptidase activity | extracellular space | hydrolase activity | lysosome | peptidase activity | proteolysis and peptidolysis
Human Homolog	CTSF[cathepsin F]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 47 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GAAGCCAGCG 1.6 0.0016 Cb medulloblastoma CCTGAGAACC (3) GAAGCCAGCG TTTGGTGTGT (2) 18.5 0.0185 P8 GC+1d culture GAAGCAGGGC GAAGCCAGCG 10.2 0.0102 P8 GC+SHH+1d culture CCTGAGAACC (3) GAAGCCAGCG 7.1 0.0071 E15 cortex CCCAGGCCCT GAAGCCAGCG 9.8 0.0098 P1 cortex AAAGCCTCCT CCCTGGTTCT GAAGCAGGGC GAAGCCAGCG 22.6 0.0226 Hypothalamus AAAGCCTCCT GAAGCCAGCG TTTGGTGTGT (2) 9 0.009 E12.5 retina CCTGAGAACC (3) 1.9 0.0019 E14.5 retina GAAGCAGGGC TTTGGTGTGT (2) 3.6 0.0036 E16.5 retina AGGATGGTAG CCCTGGTTCT GAAGCAGGGC GAAGCCAGCG 16.3 0.0163 E18.5 retina CCTGAGAACC (3) 1.8 0.0018 P0.5 retina AAAGCCTCCT GAAGCCAGCG TTTGGTGTGT (2) 19.7 0.0197 P2.5 retina GAAGCAGGGC GAAGCCAGCG 15.8 0.0158 P4.5 retina CCTGAGAACC (3) GAAGCCAGCG 23.8 0.0238 P6.5 retina CCCAGGCCCT CCCTGGTTCT GAAGCCAGCG 20 0.02 P10.5 crx- retina AAAGCCTCCT CCCAGGCCCT GAAGCCAGCG 35.4 0.0354 P10.5 crx+ retina AGGATGGTAG CCTGAGAACC (3) GAAGCCAGCG TTTGGTGTGT (2) 42.2 0.0422 Adult retinal AGGATGGTAG CCCAGGCCCT GAAGCCAGCG TTTGGTGTGT (2) 27.9 0.0279 ONL GAAGCCAGCG 9.6 0.0096