| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | AAAGAAAAAA (2) AACCTAAGGG (2) AGAGGTGGTT (2) GAAAAAAAAC (2) GGTGATGAGG
| 21.1 | 0.0211 |
| Cb medulloblastoma | AAAGAAAAAA (2) AGAGGTGGTT (2) GAAAAAAAAC (2) GCTTGTGCCA (2) GGTGATGAGG
| 27.7 | 0.0277 |
| P8 GC+1d culture | AAAGAAAAAA (2) AGAGGTGGTT (2) GAAAAAAAAC (2) GGTGATGAGG
| 26.2 | 0.0262 |
| P8 GC+SHH+1d culture | AAAGAAAAAA (2) AACCTAAGGG (2) AGAGGTGGTT (2) GAAAAAAAAC (2) GGTGATGAGG
| 28.2 | 0.0282 |
| 3T3 fibroblasts | AGAGGTGGTT (2) GGTGATGAGG
| 35 | 0.035 |
| E15 cortex | AAAGAAAAAA (2) AGAGGTGGTT (2) GGTGATGAGG
| 14.7 | 0.0147 |
| P1 cortex | AAAGAAAAAA (2) GCTTGTGCCA (2) GGTGATGAGG
| 18.1 | 0.0181 |
| Hypothalamus | AAAGAAAAAA (2) AGAGGTGGTT (2) GCTGATGAGG (3) GGTGATGAGG
| 27.1 | 0.0271 |
| E12.5 retina | AGAGGTGGTT (2) GGTGATGAGG
| 7.5 | 0.0075 |
| E14.5 retina | AGAGGTGGTT (2) GCTTGTGCCA (2) GGTGATGAGG
| 5.4 | 0.0054 |
| E16.5 retina | AAAGAAAAAA (2) AGAGGTGGTT (2) GGTGATGAGG
| 7.2 | 0.0072 |
| E18.5 retina | AAAGAAAAAA (2) AGAGGTGGTT (2) GGTGATGAGG
| 14.5 | 0.0145 |
| P0.5 retina | AAAGAAAAAA (2) AACCTAAGGG (2) AGAGGTGGTT (2) GAAAAAAAAC (2) GGTGATGAGG
| 21.8 | 0.0218 |
| P2.5 retina | AAAGAAAAAA (2) AGAGGTGGTT (2) GAAAAAAAAC (2) GGTGATGAGG
| 15.9 | 0.0159 |
| P4.5 retina | AAAGAAAAAA (2) AGAGGTGGTT (2) GCTGATGAGG (3) GGTGATGAGG
| 11.9 | 0.0119 |
| P6.5 retina | AAAGAAAAAA (2) AGAGGTGGTT (2) GAAAAAAAAC (2) GGTGATGAGG
| 21.7 | 0.0217 |
| P10.5 crx- retina | GGTGATGAGG
| 11.1 | 0.0111 |
| P10.5 crx+ retina | AGAGGTGGTT (2) GAAAAAAAAC (2) GGTGATGAGG
| 11.4 | 0.0114 |
| Adult retinal | AGAGGTGGTT (2) GGTGATGAGG
| 24.1 | 0.0241 |
| ONL | AAAGAAAAAA (2) AGAGGTGGTT (2) GGTGATGAGG
| 21 | 0.021 |