| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | ATTTGACTGG (2) CTAAGGCACT (2) GGGCACTCTG (4) TCCTAAAAAA (2)
| 8.1 | 0.0081 |
| Cb medulloblastoma | CTAAGGCACT (2) TCCTAAAAAA (2)
| 9.2 | 0.0092 |
| P8 GC+1d culture | AAGAAGAAGA (2) ATTTGACTGG (2) GGGCACTCTG (4) TCCTAAAAAA (2)
| 9.1 | 0.0091 |
| P8 GC+SHH+1d culture | ATGCAGGACC (2) ATTTGACTGG (2) CTAAGGCACT (2) GGAATCTGGA GGGCACTCTG (4) TCCTAAAAAA (2)
| 13 | 0.013 |
| 3T3 fibroblasts | ATTTGACTGG (2) CTAAGGCACT (2) GGGCACTCTG (4)
| 150.7 | 0.1507 |
| E15 cortex | ATTTGACTGG (2) GCCTCTGCGT (2)
| 9.8 | 0.0098 |
| P1 cortex | ATGCAGGACC (2) ATTTGACTGG (2) GGGCACTCTG (4)
| 22.6 | 0.0226 |
| E12.5 retina | AAGAAGAAGA (2) GGAATCTGGA GGGCACTCTG (4) TCCTAAAAAA (2)
| 7.6 | 0.0076 |
| E14.5 retina | ATTTGACTGG (2)
| 1.8 | 0.0018 |
| E16.5 retina | TCCTAAAAAA (2)
| 1.8 | 0.0018 |
| E18.5 retina | ATGCAGGACC (2) TCCTAAAAAA (2) TCCTACTAAA
| 7.2 | 0.0072 |
| P0.5 retina | GCCTCTGCGT (2) GGGCACTCTG (4)
| 4 | 0.004 |
| P2.5 retina | ATTTGACTGG (2) GGGCACTCTG (4) TCCTAAAAAA (2)
| 8.9 | 0.0089 |
| P4.5 retina | TCCTAAAAAA (2)
| 2 | 0.002 |
| P6.5 retina | AAGAAGAAGA (2) AAGGCCCTAC ATTTGACTGG (2) GCCTCTGCGT (2) GGAATCTGGA
| 8.5 | 0.0085 |
| P10.5 crx- retina | ATTTGACTGG (2) TCCTAAAAAA (2)
| 5.6 | 0.0056 |
| P10.5 crx+ retina | ATTTGACTGG (2) TCCTAAAAAA (2) TCCTACTAAA
| 5.7 | 0.0057 |
| ONL | AAGGCCCTAC
| 3.8 | 0.0038 |