Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.297096	Mdh2	malate dehydrogenase 2, NAD (mitochondrial)	5	5 78.0 cM	17448
Gene Ontology	L-malate dehydrogenase activity | malate dehydrogenase activity | malic enzyme activity | mitochondrion | mitochondrion | oxidoreductase activity | tricarboxylic acid cycle
Human Homolog	MDH2[malate dehydrogenase 2, NAD (mitochondrial)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 131 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAGGTGGAAG CTGGCCGCTC GAACGGGGAA TCCTGAACCC (2) TCCTGGAAGC (3) TCTTTGGAAC TGTACCCCCA 161.5 0.1615 Cb medulloblastoma AACGGGAAGG AAGGTGGAAG GAACGGGGAA TCTTTGGAAC TTCTTGACAA 83.2 0.0832 P8 GC+1d culture AACGGGAAGG AAGGTGGAAG AAGTGAGAGG GAACGGGGAA GCGTCCACGA (2) TATTTGGAAC (3) TCCTGAACCC (2) TCTTTGGAAC TGTACCCCCA 188.1 0.1881 P8 GC+SHH+1d culture AAGGTGGAAG CCCCCCTCCC (2) CTGGCCGCTC GAACGGGGAA TATTTGGAAC (3) TCCTGAACCC (2) TCCTGGAAGC (3) TCTGTGGAAC TCTTTGGAAC TGTACCCCCA TTCTTGACAA TTTTTGGAAC (3) 206.3 0.2063 3T3 fibroblasts AAGGTGGAAG TCATTGGAAC (2) TTCTTGACAA 126.1 0.1261 E15 cortex AAGGTGGAAG TCCTGAACCC (2) TCTTTGGAAC 59.3 0.0593 P1 cortex AAGGTGGAAG TATTTGGAAC (3) TCCTGAACCC (2) TCTTTGGAAC 68.1 0.0681 Hypothalamus AAGGTGGAAG AAGTGAGAGG ATGCTGAATA (2) CTGGCCGCTC GAACGGGGAA TATTTGGAAC (3) TCCTGAACCC (2) TCTTTGGAAC TTCTTGACAA 108.5 0.1085 E12.5 retina AAGGTGGAAG TCCTGAACCC (2) TCTTTGGAAC TGTACCCCCA 234.7 0.2347 E14.5 retina AAGGTGGAAG ATGCTGAATA (2) CTCCCAGCGT (3) TCCTGAACCC (2) TCTTTGGAAC 100.2 0.1002 E16.5 retina AAGGTGGAAG ATGCTGAATA (2) CCCCCCTCCC (2) CTCCCAGCGT (3) TATTTGGAAC (3) TCCTGAACCC (2) TCTTTGGAAC TCTTTGGACC 173.8 0.1738 E18.5 retina AAGGTGGAAG CCCCCCTCCC (2) TCCTGAACCC (2) TCTTTGGAAC TGTACCCCCA 100 0.1 P0.5 retina AAGGTGGAAG CTCCCAGCGT (3) CTGGCCGCTC GCGTCCACGA (2) TCCTGAACCC (2) TCCTGGAAGC (3) TCTGTGGAAC TCTTTGGAAC 139.6 0.1396 P2.5 retina AAGGTGGAAG TCCTGAACCC (2) TCTGTGGAAC TCTTTGGAAC TGTACCCCCA 100.4 0.1004 P4.5 retina AAGGTGGAAG ATGCTGAATA (2) TATTTGGAAC (3) TCCTGAACCC (2) TCTTTGGAAC TGTACCCCCA 79.4 0.0794 P6.5 retina AACGGGAAGG AAGGTGGAAG CTCCCAGCGT (3) TATTTGGAAC (3) TCCTGAACCC (2) TCTTTGGAAC 85.2 0.0852 P10.5 crx- retina AAGGTGGAAG AAGTGAGAGG ATGCTGAATA (2) GAACGGGGAA TCCTGAACCC (2) TCTTTGGAAC TCTTTGGACC 247.2 0.2472 P10.5 crx+ retina AACGGGAAGG AAGGTGGAAG AAGTGAGAGG CTGGCCGCTC TCCTGAACCC (2) TCTTTGGAAC TGTACCCCCA TTCTTGACAA 96 0.096 Adult retinal AACGGGAAGG AAGGTGGAAG CCCCCCTCCC (2) CTCCCAGCGT (3) CTGGCCGCTC GCGTCCACGA (2) TCCTGAACCC (2) TCTTTGGAAC TCTTTGGACC TGTACCCCCA 70.7 0.0707 ONL AACGGGAAGG AAGGTGGAAG CCCCCCTCCC (2) TCCTGAACCC (2) TCTTTGGAAC TCTTTGGGAC TTTTTGGAAC (3) 78.5 0.0785