| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | GATATGAAGA (2)
| 3.3 | 0.0033 |
| P8 GC+1d culture | AAACCTGGGG (3) ACGCTGAAAA GATATTAAAA (2) TGCTCTGGTC (2) TGGTCTGGTC
| 12.4 | 0.0124 |
| P8 GC+SHH+1d culture | ACGCTGAAAA TAAGGTGTAT TGCTCTGGTC (2) TGGTCTGGTC
| 9.4 | 0.0094 |
| 3T3 fibroblasts | TGCTCTGGTC (2) TGGTCTGGTC
| 126.2 | 0.1262 |
| Hypothalamus | ACGCTGAAAA
| 1.8 | 0.0018 |
| E12.5 retina | ACGCTGAAAA TGCTCTGGTC (2) TGGTCTGGTC
| 7.6 | 0.0076 |
| E14.5 retina | AAACTTCTTG (3) GAGATAAAAA TGCTCTGGTC (2)
| 10.9 | 0.0109 |
| E16.5 retina | AAACTTCTTG (3) GAGATAAAAA TGCTCTGGTC (2)
| 21.7 | 0.0217 |
| E18.5 retina | ACGCTGAAAA TGCTCTGGTC (2)
| 10.9 | 0.0109 |
| P0.5 retina | TAAGGTGTAT TGCTCTGGTC (2) TGGTCTGGTC
| 9.8 | 0.0098 |
| P2.5 retina | GAGATAAAAA
| 1.8 | 0.0018 |
| P4.5 retina | AAACCTGGGG (3) GAGATAAAAA TGCTCTGGTC (2) TGGTCTGGTC
| 10 | 0.01 |
| P6.5 retina | AAACCTGGGG (3) GATATTAAAA (2)
| 3.4 | 0.0034 |
| P10.5 crx- retina | TGCTCTGGTC (2)
| 1.9 | 0.0019 |
| P10.5 crx+ retina | GATATTAAAA (2)
| 1.9 | 0.0019 |
| Adult retinal | AAACTTCTTG (3) GATATTAAAA (2)
| 7.5 | 0.0075 |
| ONL | GATATTAAAA (2)
| 15.3 | 0.0153 |