Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.297949	1700084E18Rik	RIKEN cDNA 1700084E18 gene	2		67350
Mm.297949	Lrrc8	leucine rich repeat containing 8	2		241296
Gene Ontology	integral to membrane
Human Homolog	LRRC8[leucine rich repeat containing 8]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 75 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAGCAATCCG (2) GAAGGAAAAA (2) GACACCCAGG GGTTTGCTCA (2) 6.4 0.0064 Cb medulloblastoma AAGCAATCCG (2) CAAGGATTGT (2) GAAGGAAAAA (2) GAGGAGAAAA (2) GGTTTGCTCA (2) 32.4 0.0324 P8 GC+1d culture AAGCAATCCG (2) CAAGGATTGT (2) GACACCCAGG GAGGAGAAAA (2) GGTTTGCTCA (2) GTTAAGCAGC (2) 16 0.016 P8 GC+SHH+1d culture AAGCAATCCG (2) CAAGGATTGT (2) GAAGGAAAAA (2) GAGGAGAAAA (2) GGTTTGCTCA (2) 19.9 0.0199 E15 cortex GAAGGAAAAA (2) GACACCCAGG GGTTTGCTCA (2) 19.7 0.0197 P1 cortex AAGCAATCCG (2) GAAGGAAAAA (2) GGTTTGCTCA (2) 18.1 0.0181 Hypothalamus AAGCAATCCG (2) CAAGGATTGT (2) GACACCCAGG GGTTTGCTCA (2) 10.8 0.0108 E12.5 retina AAGCAATCCG (2) GAAGGAAAAA (2) GACACCCAGG 15 0.015 E14.5 retina AAGCAATCCG (2) CAAGGATTGT (2) GAAGGAAAAA (2) 9.1 0.0091 E16.5 retina AAGCAATCCG (2) CAAGGATTGT (2) GAAGGAAAAA (2) GGTTTGCTCA (2) 7.2 0.0072 E18.5 retina GAAGGAAAAA (2) GACACCCAGG GGTTTGCTCA (2) 20 0.02 P0.5 retina AAGCAATCCG (2) GAAGGAAAAA (2) GACACCCAGG GGTTTGCTCA (2) 13.8 0.0138 P2.5 retina CAAGGATTGT (2) GAAGGAAAAA (2) GACACCCAGG GAGGAGAAAA (2) GGTTTGCTCA (2) 12.4 0.0124 P4.5 retina AAGCAATCCG (2) CAAGGATTGT (2) GAAGGAAAAA (2) 19.7 0.0197 P6.5 retina CAAGGATTGT (2) GACACCCAGG GGTTTGCTCA (2) 21.6 0.0216 P10.5 crx- retina AAGCAATCCG (2) CAAGGATTGT (2) GGTTTGCTCA (2) 20.4 0.0204 P10.5 crx+ retina AAGCAATCCG (2) CAAGGATTGT (2) GAAGGAAAAA (2) GGTTTGCTCA (2) 28.9 0.0289 Adult retinal AAGCAATCCG (2) CAAGGATTGT (2) GACACCCAGG GGTTTGCTCA (2) GTTAAGCAGC (2) 27.8 0.0278 ONL AAGCAATCCG (2) CAAGGATTGT (2) GAAGGAAAAA (2) GACACCCAGG GGTTTGCTCA (2) 20.9 0.0209