| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | TGGTTGCTGG TGTCATTTAA (2) TTTAATTTTT (2)
| 71.7 | 0.0717 |
| Cb medulloblastoma | GAAAAGAAAA (3) GTGTACAGAC TGGTTGCTGG TGTCATTTAA (2)
| 124.8 | 0.1248 |
| P8 GC+1d culture | GTGTACAGAC TGGTTGCTGG TTTAATTTTT (2)
| 59.3 | 0.0593 |
| P8 GC+SHH+1d culture | GAAAAGAAAA (3) GAAAGAAAAG (2) GTGTACAGAC TGGTTGCTGG
| 96.1 | 0.0961 |
| 3T3 fibroblasts | GTGTACAGAC TGGTTGCTGG
| 224.3 | 0.2243 |
| E15 cortex | TGGTTGCTGG
| 277.1 | 0.2771 |
| P1 cortex | TGGTTGCTGG
| 86.4 | 0.0864 |
| Hypothalamus | TGGTTGCTGG TGTCATTTAA (2)
| 351.4 | 0.3514 |
| E12.5 retina | TGGTTGCTGG TGTCATTTAA (2)
| 159.6 | 0.1596 |
| E14.5 retina | TACATACAAA TGGTTGCTGG
| 938.3 | 0.9383 |
| E16.5 retina | TGGTTGCTGG
| 767.9 | 0.7679 |
| E18.5 retina | GGAAAAAAAT (2) TGGTTGCTGG
| 254.6 | 0.2546 |
| P0.5 retina | GTGTACAGAC TACATACAAA TGGTTGCTGG
| 194.4 | 0.1944 |
| P2.5 retina | GAAAAGAAAA (3) GGAAAAAAAT (2) TGGTTGCTGG TTTAATTTTT (2)
| 170.8 | 0.1708 |
| P4.5 retina | GAAAAGAAAA (3) TGGTTGCTGG TGTCATTTAA (2)
| 154.6 | 0.1546 |
| P6.5 retina | GGAAAAAAAT (2) TGGTTGCTGG TTTAATTTTT (2)
| 160.1 | 0.1601 |
| P10.5 crx- retina | TACATACAAA TGGTTGCTGG
| 282.4 | 0.2824 |
| P10.5 crx+ retina | TGGTTGCTGG
| 101.9 | 0.1019 |
| Adult retinal | GTGTACAGAC TGGTTGCTGG
| 216.7 | 0.2167 |
| ONL | GAAAGAAAAG (2) GGAAAAAAAT (2) TACATACAAA TGGTTGCTGG
| 404.1 | 0.4041 |