Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.2981	Vrk1	vaccinia related kinase 1	12		22367
Gene Ontology	ATP binding | kinase activity | protein amino acid phosphorylation | protein kinase activity | protein serine/threonine kinase activity | transferase activity
Human Homolog	VRK1[vaccinia related kinase 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 67 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAAAAATTGA (6) AAAATAAAAC GAAAAAAAAA (2) TGAGTCTTCT 60.4 0.0604 Cb medulloblastoma GAAAAAAAAA (2) GAAAAAAAAG 175.7 0.1757 P8 GC+1d culture AAAATAAAAC GAAAAAAAAA (2) GAAAAAAAAG TGAGTCTTCT 46.7 0.0467 P8 GC+SHH+1d culture AAAAAATTGA (6) AAAATAAAAC GAAAAAAAAA (2) GAAAAAAAAG TGAGTCTTCT 95.9 0.0959 E15 cortex AAAAAATTGA (6) GAAAAAAAAA (2) 64.3 0.0643 P1 cortex AAAAAATTGA (6) GAAAAAAAAA (2) GAAAAAAAAG 72.7 0.0727 Hypothalamus AAAAAATTGA (6) AAAATAAAAC GAAAAAAAAA (2) GAAAAAAAAG 72.4 0.0724 E12.5 retina AAAATAAAAC GAAAAAAAAA (2) GCCTCAGTGT (2) TGAGTCTTCT 95.8 0.0958 E14.5 retina AAAATAAAAC GAAAAAAAAA (2) TGAGTCTTCT 67.4 0.0674 E16.5 retina AAAATAAAAC GAAAAAAAAA (2) GCCTCAGTGT (2) TGAGTCTTCT 63.3 0.0633 E18.5 retina AAAAAATTGA (6) AAAATAAAAC GAAAAAAAAA (2) GAAAAAAAAG TGAGTCTTCT 118.2 0.1182 P0.5 retina AAAAAATTGA (6) AAAATAAAAC GAAAAAAAAA (2) GAAAAAAAAG TGAGTCTTCT 49 0.049 P2.5 retina AAAAAATTGA (6) AAAATAAAAC GAAAAAAAAA (2) GAAAAAAAAG GCCTCAGTGT (2) TGAGTCTTCT 109.2 0.1092 P4.5 retina AAAAAATTGA (6) AAAATAAAAC GAAAAAAAAA (2) GAAAAAAAAG TGAGTCTTCT 69.3 0.0693 P6.5 retina AAAAAATTGA (6) AAAATAAAAC GAAAAAAAAA (2) GAAAAAAAAG TGAGTCTTCT 53.4 0.0534 P10.5 crx- retina AAAAAATTGA (6) GAAAAAAAAA (2) 24.1 0.0241 P10.5 crx+ retina GAAAAAAAAA (2) 42.3 0.0423 Adult retinal AAAATAAAAC GAAAAAAAAA (2) 18.6 0.0186 ONL GAAAAAAAAA (2) 24.9 0.0249