Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.29811
1190002H23Rik
RIKEN cDNA 1190002H23 gene
14
66214
Mm.29811
1700010B09Rik
RIKEN cDNA 1700010B09 gene
14
69341
Mm.29811
A130038J17Rik
RIKEN cDNA A130038J17 gene
14
320628
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 34 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
AAGCGGCGCA
(
3
)
TTTTTTTTTT (
2
)
8.2
0.0082
Cb medulloblastoma
GGGGGGGGGG
TTTTTTTTTT (
2
)
9.2
0.0092
P8 GC+1d culture
GGGGGGGGGG
TTTTTTTTTT (
2
)
16
0.016
P8 GC+SHH+1d culture
GGGGGGGGGG
TTTTTTTTTT (
2
)
12.9
0.0129
3T3 fibroblasts
AAGCGGCGCA
(
3
)
GGGGGGGGGG
10.5
0.0105
E15 cortex
GGGGGGGGGG
TTTTTTTTTT (
2
)
9.8
0.0098
P1 cortex
TTTTTTTTTT (
2
)
4.5
0.0045
Hypothalamus
GACTCTGTGG
(
3
)
GGGGGGGGGG
TTTTTTTTTT (
2
)
14.4
0.0144
E12.5 retina
TTTTTTTTTT (
2
)
7.5
0.0075
E14.5 retina
TTTTTTTTTT (
2
)
23.7
0.0237
E16.5 retina
TTTTTTTTTT (
2
)
5.4
0.0054
E18.5 retina
TTTTTTTTTT (
2
)
10.9
0.0109
P0.5 retina
TTTTTTTTTT (
2
)
9.8
0.0098
P2.5 retina
GGGGGGGGGG
TTTTTTTTTT (
2
)
14
0.014
P4.5 retina
GGGGGGGGGG
TTTTTTTTTT (
2
)
19.8
0.0198
P6.5 retina
GGGGGGGGGG
TTTTTTTTTT (
2
)
11.6
0.0116
P10.5 crx- retina
AAGCGGCGCA
(
3
)
3.7
0.0037
P10.5 crx+ retina
GGGGGGGGGG
TTTTTTTTTT (
2
)
13.4
0.0134
Adult retinal
GGGGGGGGGG
TTTTTTTTTT (
2
)
11.1
0.0111
ONL
GGGGGGGGGG
TTTTTTTTTT (
2
)
5.7
0.0057
