Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.29812	9430014F16Rik	RIKEN cDNA 9430014F16 gene	3		77255
Mm.29812	Sep15	selenoprotein	3		93684
Gene Ontology	selenium binding
Human Homolog	SEP15[15 kDa selenoprotein]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 76 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAGTGATAAA CCAAGAGGCT (2) CCCAGCTTTC (2) CTTACACTTG (2) CTTACATTGG (2) 27.7 0.0277 Cb medulloblastoma CAAAAATAAG CCCAGCTTTC (2) CCCAGCTTTT (3) CTTACACTTG (2) 9.2 0.0092 P8 GC+1d culture AAGTGATAAA CAAAAATAAG CAGAGAGTTG (2) CCCAGCTTTC (2) CTTACACTTG (2) CTTACATTGG (2) CTTAGTGTTT (2) 21.5 0.0215 P8 GC+SHH+1d culture AAGTGATAAA CCCAGCTTTC (2) CTTACACTTG (2) CTTAGTGTTT (2) 20 0.02 3T3 fibroblasts CAGAGAGTTG (2) CCCAGCTTTC (2) 21 0.021 E15 cortex CCCAGCTTTC (2) CTTAGTGTTT (2) 14.8 0.0148 P1 cortex CCCAGCTTTC (2) 4.5 0.0045 Hypothalamus CAAAAATAAG CCAAGAGGCT (2) CCCAGCTTTC (2) CCCAGCTTTT (3) CTTACACTTG (2) CTTAGTGTTT (2) 14.4 0.0144 E12.5 retina CCCAGCTTTC (2) CTTACACTTG (2) GGCCCTCTTT 20.7 0.0207 E14.5 retina CAAAAATAAG CCCAGCTTTC (2) CTTACACTTG (2) CTTACATTGG (2) CTTAGTGTTT (2) GGCCCTCTTT 14.4 0.0144 E16.5 retina CCAAGAGGCT (2) CCCAGCTTTC (2) CTTACACTTG (2) CTTACATTGG (2) CTTAGTGTTT (2) 14.4 0.0144 E18.5 retina CCAAGAGGCT (2) CCCAGCTTTC (2) CCCAGCTTTT (3) CTTACACTTG (2) GGCCCTCTTT 18.2 0.0182 P0.5 retina CAGAGAGTTG (2) CCCAGCTTTC (2) CTTACACTTG (2) 13.8 0.0138 P2.5 retina CAAAAATAAG CCCAGCTTTC (2) CTTACACTTG (2) 10.6 0.0106 P4.5 retina CAAAAATAAG CCAAGAGGCT (2) CCCAGCTTTC (2) 11.9 0.0119 P6.5 retina AAGTGATAAA CCCAGCTTTC (2) CTTAGTGTTT (2) GGCCCTCTTT 13.4 0.0134 P10.5 crx- retina CCCAGCTTTC (2) CTTACACTTG (2) CTTACATTGG (2) 24.2 0.0242 P10.5 crx+ retina CCAAGAGGCT (2) CCCAGCTTTC (2) 17.3 0.0173 Adult retinal AAGTGATAAA CCCAGCTTTC (2) CCCAGCTTTT (3) CTTACACTTG (2) GGCCCTCTTT 20.5 0.0205 ONL CCCAGCTTTC (2) CTTACACTTG (2) CTTAGTGTTT (2) 13.4 0.0134