Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.29829	Rab5c	RAB5C, member RAS oncogene family	11	11 60.0 cM	19345
Gene Ontology	endocytic vesicle | endosome organization and biogenesis | GTP binding | GTPase activity | GTPase activity | protein transport | regulation of endocytosis | small GTPase mediated signal transduction
Human Homolog	RAB5C[RAB5C, member RAS oncogene family]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 63 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CCCCCAATTC GTGAAGAAAA TAACCAATCA 32.6 0.0326 Cb medulloblastoma CCCCCAATTC GCAATAGCTA TAACCAATCA 57.8 0.0578 P8 GC+1d culture CCCCCAATTC GTAACCAAAA (2) GTGAAGAAAA TAACCAATCA 46.9 0.0469 P8 GC+SHH+1d culture AAGAGCAAGC CCCCCAATTC GCAATAGCTA GTAACCAAAA (2) GTGAAGAAAA TAACCAATCA 47.9 0.0479 3T3 fibroblasts GTAACCAAAA (2) 3.5 0.0035 E15 cortex CCCCCAATTC TAACCAATCA 24.7 0.0247 P1 cortex CCCCCAATTC TAACCAATCA 27.3 0.0273 Hypothalamus CCCCCAATTC GTAACCAAAA (2) GTGAAGAAAA TAACCAATCA 50.6 0.0506 E12.5 retina CCCCCAATTC GCAATAGCTA GTAACCAAAA (2) TAACCAATCA 24.4 0.0244 E14.5 retina CCCCCAATTC GTGAAGAAAA TAACCAATCA 40.1 0.0401 E16.5 retina AAGAGCAAGC CCCCCAATTC GTAACCAAAA (2) GTGAAGAAAA TAACCAATCA 41.6 0.0416 E18.5 retina CCCCCAATTC GTGAAGAAAA TAACCAATCA 43.7 0.0437 P0.5 retina CCCCCAATTC GTAACCAAAA (2) TAACCAATCA 33.4 0.0334 P2.5 retina CCCCCAATTC GTAACCAAAA (2) GTGAAGAAAA TAACCAATCA 66.9 0.0669 P4.5 retina CCCCCAATTC GTAACCAAAA (2) TAACCAATCA 45.6 0.0456 P6.5 retina CCCCCAATTC GTGAAGAAAA TAACCAATCA 101.7 0.1017 P10.5 crx- retina CCCCCAATTC TAACCAATCA 89.2 0.0892 P10.5 crx+ retina CCCCCAATTC GTGAAGAAAA TAACCAATCA 90.3 0.0903 Adult retinal CCCCCAATTC TAACCAATCA 70.3 0.0703 ONL CCCCCAATTC GTAACCAAAA (2) TAACCAATCA 34.4 0.0344