| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | AAAAAAAGAA AAAAAAATAA (5) AAGAAAAAAA (3) ACTTGTGCAC CCTTTAGCTG CGCAGTCTGA CTTACTGTGG (2) GAGAAATACC GCAGGGTGGG
| 60.2 | 0.0602 |
| Cb medulloblastoma | AAAAAAAGAA AAAAAAATAA (5) AAGAAAAAAA (3) GCAGGGTGGG
| 50.9 | 0.0509 |
| P8 GC+1d culture | AAAAAAAGAA AAAAAAATAA (5) AAGAAAAAAA (3) ACTTGTGCAC CGCAGTCTGA GCAGGGTGGG TGAGTAATCA
| 60.5 | 0.0605 |
| P8 GC+SHH+1d culture | AAAAAAATAA (5) AAGAAAAAAA (3) ACTTGTGCAC CAAAAAAAGA CTTACTGTGG (2) GAGAAATACC GCAGGGTGGG TGAGTAATCA
| 73.8 | 0.0738 |
| 3T3 fibroblasts | GCAGGGTGGG
| 10.5 | 0.0105 |
| E15 cortex | AAGAAAAAAA (3) CAAAAAAAGA GCAGGGTGGG
| 69.2 | 0.0692 |
| P1 cortex | AAAAAAATAA (5) AAGAAAAAAA (3) GCAGGGTGGG
| 36.3 | 0.0363 |
| Hypothalamus | AAAAAAAGAA AAAAAAATAA (5) AAGAAAAAAA (3) CGCAGTCTGA GCAGGGTGGG
| 30.7 | 0.0307 |
| E12.5 retina | AAAAAAAGAA AAAAAAATAA (5) AAGAAAAAAA (3) ACTTGTGCAC CGCAGTCTGA GCAGGGTGGG
| 52.7 | 0.0527 |
| E14.5 retina | AAAAAAATAA (5) AAGAAAAAAA (3) CGCAGTCTGA GCAGGGTGGG
| 52.8 | 0.0528 |
| E16.5 retina | AAAAAAATAA (5) AAGAAAAAAA (3) CTTACTGTGG (2) GAGAAATACC GCAGGGTGGG
| 52.5 | 0.0525 |
| E18.5 retina | AAAAAAATAA (5) AAGAAAAAAA (3) GCAGGGTGGG
| 58.2 | 0.0582 |
| P0.5 retina | AAGAAAAAAA (3) CTTACTGTGG (2) GAGAAATACC GCAGGGTGGG
| 53.1 | 0.0531 |
| P2.5 retina | AAAAAAAGAA AAAAAAATAA (5) AAGAAAAAAA (3) CTTACTGTGG (2) GCAGGGTGGG
| 103.9 | 0.1039 |
| P4.5 retina | AAAAAAATAA (5) AAGAAAAAAA (3) ACTTGTGCAC CTTACTGTGG (2) GCAGGGTGGG
| 91.1 | 0.0911 |
| P6.5 retina | AAAAAAATAA (5) AAGAAAAAAA (3) CCTTTAGCTG CGCAGTCTGA GCAGGGTGGG
| 51.7 | 0.0517 |
| P10.5 crx- retina | AAGAAAAAAA (3) CTTACTGTGG (2) GCAGGGTGGG
| 7.5 | 0.0075 |
| P10.5 crx+ retina | AAGAAAAAAA (3) ACTTGTGCAC CGCAGTCTGA GCAGGGTGGG
| 46 | 0.046 |
| Adult retinal | AAAAAAAGAA AAAAAAATAA (5) AAGAAAAAAA (3) CCTTTAGCTG CTTACTGTGG (2) GCAGGGTGGG
| 22.4 | 0.0224 |
| ONL | AAAAAAAGAA AAAAAAATAA (5) AAGAAAAAAA (3) CCTTTAGCTG CTTACTGTGG (2) GCAGGGTGGG
| 21 | 0.021 |