| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | AAAAAAAAAA (2) ACATTTCTGT (2)
| 210.4 | 0.2104 |
| Cb medulloblastoma | AAAAAAAAAA (2) ACATTTCTGT (2)
| 800.1 | 0.8001 |
| P8 GC+1d culture | AAAAAAAAAA (2) ACATTTCTGT (2) TAATATATAA (5)
| 212.3 | 0.2123 |
| P8 GC+SHH+1d culture | AAAAAAAAAA (2) ACATTTCTGT (2) TAATATATAA (5)
| 281.1 | 0.2811 |
| 3T3 fibroblasts | AAAAAAAAAA (2) ACATTTCTGT (2)
| 35 | 0.035 |
| E15 cortex | AAAAAAAAAA (2)
| 212.8 | 0.2128 |
| P1 cortex | AAAAAAAAAA (2) ACATTTCTGT (2)
| 254.5 | 0.2545 |
| Hypothalamus | AAAAAAAAAA (2) ACATTTCTGT (2)
| 130.4 | 0.1304 |
| E12.5 retina | AAAAAAAAAA (2)
| 138.9 | 0.1389 |
| E14.5 retina | AAAAAAAAAA (2)
| 94.7 | 0.0947 |
| E16.5 retina | AAAAAAAAAA (2) ACATTTCTGT (2) ACATTTTTGT (3)
| 52.5 | 0.0525 |
| E18.5 retina | AAAAAAAAAA (2) ACATTTCTGT (2)
| 378.3 | 0.3783 |
| P0.5 retina | AAAAAAAAAA (2) ACATTTCTGT (2) TAATATATAA (5)
| 123.7 | 0.1237 |
| P2.5 retina | AAAAAAAAAA (2) TAATATATAA (5)
| 330.9 | 0.3309 |
| P4.5 retina | AAAAAAAAAA (2) ACATTTCTGT (2) ACATTTTTGT (3) TAATATATAA (5)
| 289.3 | 0.2893 |
| P6.5 retina | AAAAAAAAAA (2) ACATTTCTGT (2) TAATATATAA (5)
| 278.5 | 0.2785 |
| P10.5 crx- retina | AAAAAAAAAA (2) ACATTTCTGT (2)
| 50.2 | 0.0502 |
| P10.5 crx+ retina | AAAAAAAAAA (2) ACATTTCTGT (2)
| 101.9 | 0.1019 |
| Adult retinal | AAAAAAAAAA (2) ACATTTCTGT (2) ACATTTTTGT (3)
| 61.2 | 0.0612 |
| ONL | AAAAAAAAAA (2) TAATATATAA (5)
| 105.3 | 0.1053 |