Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.29924	Arl6ip1	ADP-ribosylation factor-like 6 interacting protein 1	7		54208
Gene Ontology	cotranslational membrane targeting | cytoplasm | cytosol | integral to membrane | integral to membrane | protein binding | translocon
Human Homolog	ARL6IP[ADP-ribosylation factor-like 6 interacting protein]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

Total 17 In Situ Hybridization Images

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SAGE Tags

Total 67 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CTGAAGATCA GGATCATTCT GGTGTGGTTT TTCTACGAGT TTCTATGAGT (2) 45.7 0.0457 Cb medulloblastoma GGATCATTCT TTCTATGAGT (2) 11.5 0.0115 P8 GC+1d culture GAATAAGATA GGTTAAGGAG TGTGTTTGTT TTCTACGAGT TTCTATGAGT (2) 35.4 0.0354 P8 GC+SHH+1d culture CTGAAGATCA GAATAAGATA GGATCATTCT TTCTACGAGT TTCTATGAGT (2) TTTTACGAGT TTTTCTGTGT (2) 41 0.041 3T3 fibroblasts GGATCATTCT 3.5 0.0035 E15 cortex TTCTACGAGT 4.9 0.0049 P1 cortex AAATCTTTGC GGATCATTCT TTTTCTGTGT (2) 18.1 0.0181 Hypothalamus AAATCTTTGC GAATAAGATA GGATCATTCT TTCTACGAGT 39.8 0.0398 E12.5 retina CTGAAGATCA GGATCATTCT TTCTACGAGT 22.6 0.0226 E14.5 retina CTGAAGATCA GGATCATTCT TTCTACGAGT 36.4 0.0364 E16.5 retina GGTTAAGGAG TTCTACGAGT 36.2 0.0362 E18.5 retina AAATCTTTGC GAATAAGATA GGATCATTCT GGTTAAGGAG TTCTACGAGT TTTTACGAGT 38.1 0.0381 P0.5 retina CTGAAGATCA TTCTACGAGT 15.7 0.0157 P2.5 retina CTGAAGATCA GGTGTGGTTT GGTTAAGGAG TGTGTTTGTT TTCTACGAGT TTTTCTGTGT (2) 54.6 0.0546 P4.5 retina TGTGTTTGTT TTCTACGAGT TTTTACGAGT 21.8 0.0218 P6.5 retina AAATCTTTGC GGATCATTCT GGTTAAGGAG TTCTACGAGT 33.4 0.0334 P10.5 crx- retina CTGAAGATCA TTCTATGAGT (2) 9.3 0.0093 P10.5 crx+ retina CTGAAGATCA TTCTATGAGT (2) 11.5 0.0115 Adult retinal GGTTAAGGAG TTCTACGAGT 16.7 0.0167 ONL GAATAAGATA TTCTACGAGT TTCTATGAGT (2) TTTTACGAGT 9.5 0.0095