Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.299367	Hnrpa1	heterogeneous nuclear ribonucleoprotein A1	15	15 61.7 cM	15382
Gene Ontology	mRNA processing | mRNA-nucleus export | nucleus | ribonucleoprotein complex | RNA binding | RNA processing | transport
Human Homolog	HNRPA1[heterogeneous nuclear ribonucleoprotein A1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 139 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC ACGCTGAATA ATAATGGATA CAGTTGGGTT CTGTTGATTG GCAGTGAGTG (2) GGGAAAAAAA (5) GGTGAAAAAG TGTACTCAAT TGTGTGGGCA 278.9 0.2789 Cb medulloblastoma ACGCTGAATA CAGTTGGGTT GGGAAAAAAA (5) TGTACTCAAT 117.9 0.1179 P8 GC+1d culture ACGCTGAATA ACTCTGTGGA ATAATGGATA CAGTTGGGTT GGGAAAAAAA (5) TGTACTCAAT TGTGTGGGCA 176.8 0.1768 P8 GC+SHH+1d culture ACGCTGAATA ACTCTGTGGA AGGTCTGTGG ATAATGGATA CAGTTGGGTT CTGTTGATTG GCAGTGAGTG (2) GGCGTGGTGG (3) GGGAAAAAAA (5) GGTGAAAAAG TCTTCTTTGT TGCACTCAAT TGTACTCAAT 231.9 0.2319 3T3 fibroblasts ACGCTGAATA ATAATGGATA CAGTTGGGTT GCAGTGAGTG (2) TGTACTCAAT 35 0.035 E15 cortex ACGCTGAATA ATAATGGATA CAGTTGGGTT GCAGTGAGTG (2) GGCGTGGTGG (3) TGTACTCAAT 84 0.084 P1 cortex ATAATGGATA CAGTTGGGTT GGGAAAAAAA (5) TGTACTCAAT 99.9 0.0999 Hypothalamus ACGCTGAATA AGGTCTGTGG ATAATGGATA CAGTTGGGTT GGGAAAAAAA (5) GGTGAAAAAG TGTACTCAAT 77.8 0.0778 E12.5 retina ACGCTGAATA AGGTCTGTGG ATAATGGATA CAGTTGGGTT CTGTTGATTG GGTGAAAAAG TGTACTCAAT 424.3 0.4243 E14.5 retina ACGCTGAATA ATAATGGATA CAGTTGGGTT GCAGTGAGTG (2) GGGAAAAAAA (5) TCTTCTTTGT TGTACTCAAT 224 0.224 E16.5 retina ACGCTGAATA AGGTCTGTGG ATAATGGATA CAGTTGGGTT GCAGTGAGTG (2) GGGAAAAAAA (5) TCTTCTTTGT TGCACTCAAT TGTACTCAAT TGTGTGGGCA 204.4 0.2044 E18.5 retina ACGCTGAATA ATAATGGATA CAGTTGGGTT CTGTTGATTG GCAGTGAGTG (2) GGGAAAAAAA (5) TGCACTCAAT TGTACTCAAT 314.5 0.3145 P0.5 retina ACGCTGAATA ACTCTGTGGA ATAATGGATA CAGTTGGGTT GCAGTGAGTG (2) GGCGTGGTGG (3) GGGAAAAAAA (5) TGTACTCAAT 149.2 0.1492 P2.5 retina ACGCTGAATA AGGTCTGTGG ATAATGGATA CAGTTGGGTT GGCGTGGTGG (3) GGGAAAAAAA (5) TGTACTCAAT 248.1 0.2481 P4.5 retina ACGCTGAATA ATAATGGATA CAGTTGGGTT GCAGTGAGTG (2) GGCGTGGTGG (3) GGGAAAAAAA (5) TGTACTCAAT 241.7 0.2417 P6.5 retina ACGCTGAATA AGGTCTGTGG CAGTTGGGTT GGGAAAAAAA (5) GGTGAAAAAG TGTACTCAAT 165 0.165 P10.5 crx- retina ACGCTGAATA ATAATGGATA CAGTTGGGTT GGGAAAAAAA (5) TGTACTCAAT TGTGTGGGCA 68.6 0.0686 P10.5 crx+ retina ACGCTGAATA CAGTTGGGTT GCAGTGAGTG (2) GGGAAAAAAA (5) TGTACTCAAT 94.2 0.0942 Adult retinal ACGCTGAATA AGGTCTGTGG CAGTTGGGTT GGCGTGGTGG (3) GGGAAAAAAA (5) TGTACTCAAT 70.5 0.0705 ONL ACGCTGAATA ACTCTGTGGA ATAATGGATA CAGTTGGGTT GGCGTGGTGG (3) GGGAAAAAAA (5) TGTACTCAAT 89.9 0.0899