Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.299774	Jup	junction plakoglobin	11	11 60.0 cM	16480
Gene Ontology	cell adhesion | cell-cell adherens junction | cytoskeleton | cytosol | desmosome | intercellular junction | protein binding | structural molecule activity
Human Homolog	JUP[junction plakoglobin] | JUP[junction plakoglobin]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 66 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CCTTTAATCC (3) GATGAGGATG GGTTTGGGGG 58.8 0.0588 Cb medulloblastoma CCTTTAATCC (3) GGTTTGGGGG 43.9 0.0439 P8 GC+1d culture CCTTTAATCC (3) CTGGCCTAGC GGTTTGGGGG TGCAGGAGGT 44.5 0.0445 P8 GC+SHH+1d culture AGAGGGGCAG CCTTTAATCC (3) GGTTTGGGGG TGCAGGAGGT 34 0.034 3T3 fibroblasts AGAGGGGCAG CCTTTAATCC (3) GATGAGGATG 80.6 0.0806 E15 cortex CCTTTAATCC (3) GATGAGGATG GCTGGCCTAG TGCTGTCTCC 79.1 0.0791 P1 cortex CCTTTAATCC (3) 154.5 0.1545 Hypothalamus CCTTTAATCC (3) GATGAGGATG TGCTGTCTCC 27.1 0.0271 E12.5 retina AACACCAGTG (3) CCTTTAATCC (3) 78.9 0.0789 E14.5 retina CCTTTAATCC (3) GCCTTTTTAC GCTGGCCTAG TGCAGGAGGT 127.5 0.1275 E16.5 retina CCTTTAATCC (3) GGTTTGGGGG 76 0.076 E18.5 retina CCTTTAATCC (3) GCTGGCCTAG GGTTTGGGGG TGCAGGAGGT TGCTGTCTCC 30.8 0.0308 P0.5 retina CCTTTAATCC (3) GGGAAAAACA GGTTTGGGGG TGCTGTCTCC 78.6 0.0786 P2.5 retina CCTTTAATCC (3) GATGAGGATG GCCTTTTTAC GGTTTGGGGG TGCTGTCTCC 88 0.088 P4.5 retina CCTTTAATCC (3) CTGGCCTAGC GGTTTGGGGG 47.6 0.0476 P6.5 retina CCTTTAATCC (3) GATGAGGATG GGTTTGGGGG 76.7 0.0767 P10.5 crx- retina CCTTTAATCC (3) CTGGCCTAGC 65.1 0.0651 P10.5 crx+ retina AACACCAGTG (3) CCTTTAATCC (3) GGGAAAAACA GGTTTGGGGG TGCTGTCTCC 49.9 0.0499 Adult retinal CCTTTAATCC (3) CTGGCCTAGC GGTTTGGGGG 135.2 0.1352 ONL CCTTTAATCC (3) GCCTTTTTAC GCTGGCCTAG GGGAAAAACA 90 0.09