| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | GTGTATCTTT (2) TTAAAAAAAA (2)
| 53.9 | 0.0539 |
| Cb medulloblastoma | CCAATGTCTG (2) GTGTATCTTT (2) TTAAAAAAAA (2)
| 69.4 | 0.0694 |
| P8 GC+1d culture | CCAATGTCTG (2) CTGTGGAATG GTGTATCTTT (2) TTAAAAAAAA (2)
| 65.1 | 0.0651 |
| P8 GC+SHH+1d culture | CCAATGTCTG (2) CTGTGGAATG GTGTATCTTT (2) TAGCCAAAAA (2) TTAAAAAAAA (2)
| 71.6 | 0.0716 |
| 3T3 fibroblasts | CCAATGTCTG (2) GTGTATCTTT (2)
| 14 | 0.014 |
| E15 cortex | GTGTATCTTT (2) TTAAAAAAAA (2)
| 9.8 | 0.0098 |
| P1 cortex | GTGTATCTTT (2) TTAAAAAAAA (2)
| 27.2 | 0.0272 |
| Hypothalamus | CCAATGTCTG (2) CTGTGGAATG GTGTATCTTT (2) TTAAAAAAAA (2)
| 30.7 | 0.0307 |
| E12.5 retina | CCAATGTCTG (2) GTGTATCTTT (2) TAGCCAAAAA (2) TTAAAAAAAA (2)
| 80.8 | 0.0808 |
| E14.5 retina | GTGAAGACCA GTGTATCTTT (2) TTAAAAAAAA (2)
| 56.5 | 0.0565 |
| E16.5 retina | GTGTATCTTT (2) TTAAAAAAAA (2)
| 59.8 | 0.0598 |
| E18.5 retina | GTGTATCTTT (2) TTAAAAAAAA (2)
| 112.7 | 0.1127 |
| P0.5 retina | CTGTGGAATG GTGTATCTTT (2) TTAAAAAAAA (2)
| 64.8 | 0.0648 |
| P2.5 retina | GTGTATCTTT (2) TTAAAAAAAA (2)
| 110.9 | 0.1109 |
| P4.5 retina | GTGTATCTTT (2) TTAAAAAAAA (2)
| 85.2 | 0.0852 |
| P6.5 retina | CTGTGGAATG GTGTATCTTT (2) TAGCCAAAAA (2) TTAAAAAAAA (2)
| 70.1 | 0.0701 |
| P10.5 crx- retina | CTGTGGAATG GTGTATCTTT (2) TTAAAAAAAA (2)
| 29.8 | 0.0298 |
| P10.5 crx+ retina | GTGTATCTTT (2) TAGCCAAAAA (2) TTAAAAAAAA (2)
| 42.3 | 0.0423 |
| Adult retinal | GTGTATCTTT (2) TTAAAAAAAA (2)
| 22.2 | 0.0222 |
| ONL | GTGAAGACCA GTGTATCTTT (2) TTAAAAAAAA (2)
| 26.8 | 0.0268 |