Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.30038	Epb4.1	erythrocyte protein band 4.1	4	4 65.7 cM	269587
Gene Ontology	actin binding | actin cytoskeleton | actin cytoskeleton organization and biogenesis | cortical actin cytoskeleton organization and biogenesis | cytoplasm | cytoskeletal protein binding | cytoskeleton | membrane | nucleus | regulation of cell shape | spectrin binding | structural molecule activity
Human Homolog	EPB41[erythrocyte membrane protein band 4.1 (elliptocytosis 1, RH-linked)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 80 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AACACTTGAC ACAAAAATGA 9.8 0.0098 Cb medulloblastoma AACACTTGAC AAGACTTGAG ACAAAAATGA ATGAAAAGAC CCAGCATCAG GAAGGTGGAA GCTGGATTCT 20.7 0.0207 P8 GC+1d culture AACACTTGAC ACAAAAATGA TATGGAATTG TGATAAAAAA 10.2 0.0102 P8 GC+SHH+1d culture AACACTTGAC AAGCTCATTC ACAAAAATGA ATGAAAAGAC GAGGTGGAAA (3) TATGGAATTG 14.1 0.0141 P1 cortex AACACTTGAC 4.5 0.0045 Hypothalamus ACAAAAATGA ATGAAAAGAC GAGGTGGAAA (3) GCTGGATTCT 9 0.009 E12.5 retina AACACTTGAC ACAAAAATGA ATGAAAAGAC GAAGGTGGAA GAGGTGGAAA (3) GCTGGATTCT 22.7 0.0227 E14.5 retina AACACTTGAC ACAAAAATGA ATGAAAAGAC GAGGTGGAAA (3) GCTGGATTCT 14.5 0.0145 E16.5 retina AACACTTGAC ACAAAAATGA GAGGTGGAAA (3) 23.5 0.0235 E18.5 retina AACACTTGAC ATGAAAAGAC GAGGTGGAAA (3) TGATAAAAAA 14.6 0.0146 P0.5 retina AACACTTGAC AAGCTCATTC GAGGTGGAAA (3) 9.9 0.0099 P2.5 retina AACACTTGAC ACAAAAATGA CCAGCATCAG GAAGGTGGAA GAGGTGGAAA (3) TATGGAATTG 26.5 0.0265 P4.5 retina AACACTTGAC ACAAAAATGA ATGAAAAGAC CCAGCATCAG GAGGTGGAAA (3) TGATAAAAAA 29.8 0.0298 P6.5 retina ACAAAAATGA ATGAAAAGAC GAAGGTGGAA GAGGTGGAAA (3) 13.4 0.0134 P10.5 crx- retina AACACTTGAC ACAAAAATGA GAGGTGGAAA (3) 33.4 0.0334 P10.5 crx+ retina AACACTTGAC AAGCTCATTC ACAAAAATGA AGGCTTGACA TATGGAATTG TGATAAAAAA 28.7 0.0287 Adult retinal AACACTTGAC AAGACTTGAG AAGCTCATTC ACAAAAATGA AGGCTTGACA CAGCTCAGGA (2) 24.2 0.0242 ONL AACACTTGAC AAGACTTGAG ACAAAAATGA ATGAAAAGAC 32.5 0.0325