Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.30136	Cherp	calcium homeostasis endoplasmic reticulum protein	8	8 34.5 cM	27967
Gene Ontology	calcium ion homeostasis | cytoplasm | molecular_function unknown | negative regulation of cell proliferation
Human Homolog	CHERP[calcium homeostasis endoplasmic reticulum protein]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 106 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CCTCCCAGTG (2) GAGATGCCGA (3) GCTGCAGCCA GCTGGGTCAA (2) GGGTGCTGGG (2) GTGGGGGTGG TGCTGTTAAC (3) 24.4 0.0244 Cb medulloblastoma CCTCCCAGTG (2) GGGTGCTGGG (2) TGCTGTTAAC (3) TTTTTTGTTT (3) 18.4 0.0184 P8 GC+1d culture CCTCCCAGTG (2) GAGATGCCGA (3) GCTGCAGCCA GGGTGCTGGG (2) GTGGGGGTGG TGCTGTTAAC (3) TTTTTTGTTT (3) 30.7 0.0307 P8 GC+SHH+1d culture CCTCCCAGTG (2) GAGATGCCGA (3) GCTGCAGCCA GGGTGCTGGG (2) TGCTGTTAAC (3) TGTGTCTGCT TTTTTTGTTT (3) 29.4 0.0294 3T3 fibroblasts CTCTGTGCTG (4) 3.5 0.0035 E15 cortex CCTCCCAGTG (2) GAGATGCCGA (3) GTAGCGCACG TGCTGTTAAC (3) TTTTTTGTTT (3) 29.5 0.0295 P1 cortex GTAGCGCACG GTGACTGTGA TTTTTTGTTT (3) 13.5 0.0135 Hypothalamus CCTCCCAGTG (2) CTCTGTGCTG (4) GGGTGCTGGG (2) GTGGGGGTGG TGCTGTTAAC (3) 12.6 0.0126 E12.5 retina CCTCCCAGTG (2) GAGATGCCGA (3) GGGTGCTGGG (2) TTTTTTGTTT (3) 13.2 0.0132 E14.5 retina CCAGGTGCTG (2) CCTCCCAGTG (2) GAGATGCCGA (3) GGGTGCTGGG (2) TGCTGTTAAC (3) TGTGTCTGCT 34.5 0.0345 E16.5 retina CCTCCCAGTG (2) GAGATGCCGA (3) GCTGGGTCAA (2) GGGTGCTGGG (2) GTGACTGTGA TGCTGTTAAC (3) TGTGTCTGCT TTTTTTGTTT (3) 32.5 0.0325 E18.5 retina CCTCCCAGTG (2) GAGATGCCGA (3) GGGTGCTGGG (2) TGCTGTTAAC (3) TGTGTCTGCT 21.8 0.0218 P0.5 retina CCTCCCAGTG (2) CTCTGTGCTG (4) GCTGCAGCCA GTAGCGCACG TGCTGTTAAC (3) 17.8 0.0178 P2.5 retina CCTCCCAGTG (2) CTCTGTGCTG (4) GAGATGCCGA (3) GTGACTGTGA TGCTGTTAAC (3) 23 0.023 P4.5 retina CCTCCCAGTG (2) CTCTGTGCTG (4) GAGATGCCGA (3) GCTGCAGCCA GGGTGCTGGG (2) TGCTGTTAAC (3) TTTTTTGTTT (3) 29.7 0.0297 P6.5 retina CCAGGTGCTG (2) CCTCCCAGTG (2) CTCTGTGCTG (4) GAGATGCCGA (3) GGGTGCTGGG (2) TGCTGTTAAC (3) 18.4 0.0184 P10.5 crx- retina CCAGGTGCTG (2) CCTCCCAGTG (2) CTCTGTGCTG (4) GAGATGCCGA (3) TGCTGTTAAC (3) 15 0.015 P10.5 crx+ retina CCTCCCAGTG (2) GAGATGCCGA (3) GCTGCAGCCA GCTGGGTCAA (2) GGGTGCTGGG (2) TGCTGTTAAC (3) TTTTTTGTTT (3) 17.2 0.0172 Adult retinal CCAGGTGCTG (2) CCTCCCAGTG (2) GAGATGCCGA (3) GGGTGCTGGG (2) TGCTGTTAAC (3) 26.1 0.0261 ONL GAGATGCCGA (3) GGGTGCTGGG (2) GTAGCGCACG TGTGTCTGCT 9.5 0.0095