Mouse Retina SAGE Library

[Home]    [Libraries]    [Images]

---

Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

---

UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.301522	Taf5	TAF5 RNA polymerase II, TATA box binding protein (TBP)-associated factor	19		226182
Gene Ontology	nucleus | regulation of transcription | regulation of transcription, DNA-dependent | transcription factor activity | transcription factor TFIID complex | transcription regulator activity
Human Homolog	TAF5[TAF5 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 100kDa]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 83 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAAATGAAGC ACGTCAATCT GGACTTAACA GTGGGCAGCC (3) TAAAAGAAAA TAATACTCAA 42.3 0.0423 Cb medulloblastoma TAAAAGAAAA TAATACTCAA TAATATTCAA (2) 117.9 0.1179 P8 GC+1d culture TAAAAGAAAA TAATACTCAA TAATATTCAA (2) 79.9 0.0799 P8 GC+SHH+1d culture AAAATGAAGC GGACTTAACA GTGGGCAGCC (3) TAAAAGAAAA TAATACTCAA TAATATTCAA (2) 99.6 0.0996 3T3 fibroblasts GTGGGCAGCC (3) TAATACTCAA 7 0.007 E15 cortex TAAAAGAAAA 9.9 0.0099 P1 cortex TAAAAGAAAA TAATACTCAA 31.8 0.0318 Hypothalamus AAAATGAAGC ACGTCAATCT CTAAAATCAC (3) GGACTTAACA GGGAGTTGTG (3) TAAAAGAAAA TAATACTCAA TAATATTCAA (2) 242.7 0.2427 E12.5 retina AAAATGAAGC GGGAGTTGTG (3) TAAAAGAAAA TAATACTCAA TAATATTCAA (2) 63.9 0.0639 E14.5 retina AAAATGAAGC ACGTCAATCT GCTACATATG (2) TAAAAGAAAA TAATACTCAA 83.8 0.0838 E16.5 retina ACGTCAATCT GGACTTAACA TAAAAGAAAA TAATACTCAA 77.8 0.0778 E18.5 retina CTAAAATCAC (3) TAAAAGAAAA TAATACTCAA 110.9 0.1109 P0.5 retina GTGGGCAGCC (3) TAAAAGAAAA TAATACTCAA TAATATTCAA (2) 35.5 0.0355 P2.5 retina AAAATGAAGC ACGTCAATCT GCTACATATG (2) TAAAAGAAAA TAATACTCAA TAATATTCAA (2) 74 0.074 P4.5 retina AAAATGAAGC GGACTTAACA TAAAAGAAAA TAATACTCAA TAATATTCAA (2) 123 0.123 P6.5 retina GGACTTAACA TAAAAGAAAA TAATACTCAA TAATATTCAA (2) 81.7 0.0817 P10.5 crx- retina CTAAAATCAC (3) GGACTTAACA TAAAAGAAAA TAATACTCAA TAATATTCAA (2) 50.2 0.0502 P10.5 crx+ retina GGACTTAACA TAAAAGAAAA TAATACTCAA 51.9 0.0519 Adult retinal GCTACATATG (2) TAAAAGAAAA TAATACTCAA 27.8 0.0278 ONL AAAATGAAGC CTAAAATCAC (3) GGGAGTTGTG (3) TAAAAGAAAA TAATACTCAA 47.9 0.0479