| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | ATTTTTAAAA (4)
| 4.9 | 0.0049 |
| Cb medulloblastoma | ATTTTTAAAA (4)
| 11.6 | 0.0116 |
| P8 GC+1d culture | AGCCACGGGG (3) ATTTTTAAAA (4)
| 17.1 | 0.0171 |
| P8 GC+SHH+1d culture | AGCCACGGGG (3) ATTTTTAAAA (4)
| 9.4 | 0.0094 |
| 3T3 fibroblasts | AGCCACGGGG (3) GGCAAGGGTC (2)
| 28 | 0.028 |
| E15 cortex | AGCCACGGGG (3) GGGTTTTGGG (6)
| 19.8 | 0.0198 |
| P1 cortex | ATTTTTAAAA (4) GGCAAGGGTC (2)
| 18.1 | 0.0181 |
| Hypothalamus | ATTTTTAAAA (4)
| 16.3 | 0.0163 |
| E12.5 retina | AGCCACGGGG (3) ATTTTTAAAA (4)
| 9.4 | 0.0094 |
| E14.5 retina | AGCCACGGGG (3) ATTTTTAAAA (4)
| 5.4 | 0.0054 |
| E16.5 retina | AGCCACGGGG (3)
| 3.6 | 0.0036 |
| E18.5 retina | AGCCACGGGG (3) ATTTTTAAAA (4)
| 9.1 | 0.0091 |
| P0.5 retina | AGCCACGGGG (3) ATTTTTAAAA (4)
| 19.6 | 0.0196 |
| P2.5 retina | AGCCACGGGG (3) ATGAACAGTG (3) ATTTTTAAAA (4)
| 10.6 | 0.0106 |
| P4.5 retina | AGCCACGGGG (3) ATTTTTAAAA (4)
| 6 | 0.006 |
| P6.5 retina | AGCCACGGGG (3) ATTTTTAAAA (4) GGGTTTTGGG (6)
| 11.7 | 0.0117 |
| P10.5 crx- retina | ATGAACAGTG (3) ATTTTTAAAA (4)
| 7.5 | 0.0075 |
| P10.5 crx+ retina | AGCCACGGGG (3) ATTTTTAAAA (4)
| 5.7 | 0.0057 |
| Adult retinal | AGCCACGGGG (3) ATTTTTAAAA (4) GGCAAGGGTC (2)
| 13.1 | 0.0131 |
| ONL | ATGAACAGTG (3) ATTTTTAAAA (4)
| 11.5 | 0.0115 |