| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | TAAGCTATTC TGACCCTTGC (3) TGACTGCCGT (2)
| 4.8 | 0.0048 |
| Cb medulloblastoma | CCCAGCTCTG (4) TAAGCTATTC TCAGCTCTGA TGACCCTTGC (3) TGACTGCCGT (2)
| 20.7 | 0.0207 |
| P8 GC+1d culture | ACTGGGGCAG CCCAGCTCTG (4) TAAGCTATTC TGACTGCCGT (2)
| 10.3 | 0.0103 |
| P8 GC+SHH+1d culture | CCCAGCTCTG (4) GCTTGTGAAC TAAGCTATTC TGACCCTTGC (3)
| 9.4 | 0.0094 |
| 3T3 fibroblasts | TGACCCTTGC (3)
| 3.5 | 0.0035 |
| E15 cortex | TGACTGCCGT (2)
| 4.9 | 0.0049 |
| Hypothalamus | ACTGGGGCAG CCCAGCTCTG (4) TAAGCTATTC TCAGCTCTGA TGACCCTTGC (3)
| 19.8 | 0.0198 |
| E12.5 retina | TAAGCTATTC TGACTGCCGT (2)
| 9.4 | 0.0094 |
| E14.5 retina | ACTGTGGAGA (3) TAAGCTATTC TCAGCTCTGA
| 9 | 0.009 |
| E16.5 retina | ACTGGGGCAG ACTGTGGAGA (3) TAAGCTATTC TGACCCTTGC (3)
| 14.5 | 0.0145 |
| E18.5 retina | TAAGCTATTC TGACTGCCGT (2)
| 9.1 | 0.0091 |
| P0.5 retina | ACTGTGGAGA (3) TGACTGCCGT (2)
| 4 | 0.004 |
| P2.5 retina | TCAGCTCTGA
| 1.8 | 0.0018 |
| P4.5 retina | TCAGCTCTGA
| 2 | 0.002 |
| P6.5 retina | TAAGCTATTC
| 3.3 | 0.0033 |
| P10.5 crx- retina | TAAGCTATTC
| 5.6 | 0.0056 |
| P10.5 crx+ retina | GCTTGTGAAC TCAGCTCTGA TGACTGCCGT (2)
| 9.6 | 0.0096 |
| Adult retinal | CCCAGCTCTG (4) TAAGCTATTC TCAGCTCTGA
| 9.4 | 0.0094 |
| ONL | GCTTGTGAAC TAAGCTATTC TGACTGCCGT (2)
| 15.3 | 0.0153 |