| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | AAAGGGGAGG (4) CTGCAGAACT (2) GACAATCAGG
| 8.2 | 0.0082 |
| Cb medulloblastoma | AAAGGGGAGG (4) CTGCAGAACT (2) GGGCTGGGAA (3)
| 11.5 | 0.0115 |
| P8 GC+1d culture | AAAGGGGAGG (4) GACAATCAGG GGGTACCCAG
| 5.7 | 0.0057 |
| P8 GC+SHH+1d culture | GACAATCAGG GCCTGACCCT
| 3.5 | 0.0035 |
| 3T3 fibroblasts | GTTGGGTCTT
| 3.5 | 0.0035 |
| E15 cortex | AAAGGGGAGG (4)
| 4.9 | 0.0049 |
| P1 cortex | GACAATCAGG GGGCTGGGAA (3)
| 9 | 0.009 |
| Hypothalamus | GGGCTGGGAT
| 1.8 | 0.0018 |
| E12.5 retina | AAAGGGGAGG (4) GACAATCAGG GGGCTGGGAT
| 9.4 | 0.0094 |
| E14.5 retina | CTGCAGAACT (2) GAGAAGATGA (2) GGGTACCCAG
| 7.2 | 0.0072 |
| E16.5 retina | GAGAAGATGA (2)
| 1.8 | 0.0018 |
| E18.5 retina | GAGAAGATGA (2)
| 1.8 | 0.0018 |
| P0.5 retina | AAAGGGGAGG (4) CTGCAGAACT (2)
| 5.9 | 0.0059 |
| P2.5 retina | AAAGGGGAGG (4) GACAATCAGG
| 10.5 | 0.0105 |
| P4.5 retina | GACAATCAGG GTTGGGTCTT
| 4 | 0.004 |
| P6.5 retina | AAAGGGGAGG (4) CTGCAGAACT (2) GTTGGGTCTT
| 8.4 | 0.0084 |
| P10.5 crx- retina | GGGTACCCAG
| 1.9 | 0.0019 |
| P10.5 crx+ retina | GACAATCAGG GAGAAGATGA (2) GGGCTGGGAT
| 5.7 | 0.0057 |
| Adult retinal | AAAGGGGAGG (4) GACAATCAGG
| 5.6 | 0.0056 |
| ONL | AAAGGGGAGG (4) GACAATCAGG GCCTGACCCT
| 9.5 | 0.0095 |