Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.302613
Podxl2
podocalyxin-like 2
6
319655
Human Homolog
PODXL2[podocalyxin-like 2]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 27 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
GGCAGCAAAC
(
3
)
14.7
0.0147
Cb medulloblastoma
GAAGACCCAG
GGCAGCAAAC
(
3
)
11.5
0.0115
P8 GC+1d culture
CCTGTGAGGG
GGCAGCAAAC
(
3
)
21.6
0.0216
P8 GC+SHH+1d culture
CCTGTGAGGG
GAAGACCCAG
GGCAGCAAAC
(
3
)
15.2
0.0152
3T3 fibroblasts
CCTGTGAGGG
7
0.007
E15 cortex
GGCAGCAAAC
(
3
)
89.1
0.0891
P1 cortex
GGCAGCAAAC
(
3
)
22.7
0.0227
Hypothalamus
GAAGACCCAG
GGCAGCAAAC
(
3
)
10.9
0.0109
E12.5 retina
GGCAGCAAAC
(
3
)
3.8
0.0038
E14.5 retina
GAAGACCCAG
1.8
0.0018
E16.5 retina
GGCAGCAAAC
(
3
)
5.4
0.0054
P0.5 retina
GAAGACCCAG
GGCAGCAAAC
(
3
)
9.9
0.0099
P2.5 retina
GGCAGCAAAC
(
3
)
10.6
0.0106
P4.5 retina
GGCAGCAAAC
(
3
)
13.9
0.0139
P6.5 retina
GGCAGCAAAC
(
3
)
25
0.025
P10.5 crx- retina
GAAGACCCAG
GGCAGCAAAC
(
3
)
35.3
0.0353
P10.5 crx+ retina
GAAGACCCAG
GGCAGCAAAC
(
3
)
19.2
0.0192
Adult retinal
GGCAGCAAAC
(
3
)
18.5
0.0185
ONL
GAAGACCCAG
1.9
0.0019
