Mouse Retina SAGE Library

[Home]    [Libraries]    [Images]

---

Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

---

UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.302865	Cyp11a1	cytochrome P450, family 11, subfamily a, polypeptide 1	9	9 31.0 cM	13070
Gene Ontology	C21-steroid hormone biosynthesis | cholesterol metabolism | electron transport | membrane | mitochondrion | monooxygenase activity | oxidoreductase activity
Human Homolog	CYP11A1[cytochrome P450, family 11, subfamily A, polypeptide 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 71 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAAATGGAGA (4) ACCCTGCAGT CAAATCCCCC CCTGGAAGAA (2) TTGAGGGTGG (2) 14.6 0.0146 Cb medulloblastoma AAAATGGAGA (4) ACCCTGCAGT TTGAGGGTGG (2) 13.8 0.0138 P8 GC+1d culture ACCCTGCAGT AGACCTGACA CAAATCCCCC GGGATGCTGG (2) TACCCACCTA (2) TTGAGGGTGG (2) 14.7 0.0147 P8 GC+SHH+1d culture ACCCTGCAGT CAAATCCCCC CCTGGAAGAA (2) GGGATGCTGG (2) TTGAGGGTGG (2) 16.4 0.0164 3T3 fibroblasts ACCCTGCAGT 28 0.028 E15 cortex ACCCTGCAGT CAAATCCCCC GGGATGCTGG (2) 14.7 0.0147 P1 cortex ACCCTGCAGT 4.5 0.0045 Hypothalamus ACCCTGCAGT GGGATGCTGG (2) TTGAGGGTGG (2) 7.2 0.0072 E12.5 retina ACCCTGCAGT TACCCACCTA (2) TTGAGGGTGG (2) 9.5 0.0095 E14.5 retina AAAATGGAGA (4) ACCCTGCAGT CAAATCCCCC TTGAGGGTGG (2) 9 0.009 E16.5 retina ACCCTGCAGT CAAATCCCCC CCTGGAAGAA (2) TTGAGGGTGG (2) 14.4 0.0144 E18.5 retina ACCCTGCAGT TTGAGGGTGG (2) 5.4 0.0054 P0.5 retina AAAATGGAGA (4) ACCCTGCAGT CAAATCCCCC CCTGGAAGAA (2) GGGATGCTGG (2) TTGAGGGTGG (2) 21.7 0.0217 P2.5 retina ACCCTGCAGT CAAATCCCCC TACCCACCTA (2) TTGAGGGTGG (2) 17.7 0.0177 P4.5 retina ACCCTGCAGT CAAATCCCCC TTGAGGGTGG (2) 23.8 0.0238 P6.5 retina ACCCTGCAGT AGACCTGACA CAAATCCCCC TTGAGGGTGG (2) 8.4 0.0084 P10.5 crx- retina AAAATGGAGA (4) ACCCTGCAGT CAAATCCCCC CCTGGAAGAA (2) GGGATGCTGG (2) 22.4 0.0224 P10.5 crx+ retina ACCCTGCAGT CAAATCCCCC TTGAGGGTGG (2) 11.5 0.0115 Adult retinal ACCCTGCAGT CAAATCCCCC GGGATGCTGG (2) 13.1 0.0131 ONL AGACCTGACA CAAATCCCCC GGGATGCTGG (2) 5.7 0.0057