| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | AAGGGTGCTG (2) TGGTCAAAAA
| 3.2 | 0.0032 |
| Cb medulloblastoma | AAGGGTGCTG (2) AGCTCGGAAT GTGGCCTGTG TGGGTCAAAC TGGTCAAAAA
| 32.3 | 0.0323 |
| P8 GC+1d culture | AAGGGTGCTG (2) AGCTCGGAAT TGGGTCAAAC TGGTCAAAAA
| 17.1 | 0.0171 |
| P8 GC+SHH+1d culture | AAGGGTGCTG (2) CAAAAAAAGA TGGGTCAAAC TGGTCAAAAA
| 8.2 | 0.0082 |
| 3T3 fibroblasts | AAGGGTGCTG (2) AGAGCGAAGG
| 28 | 0.028 |
| E15 cortex | AGAGCGAAGG CAAAAAAAGA
| 19.8 | 0.0198 |
| P1 cortex | AGAGCGAAGG CTAGACAGGC TGGGTCAAAC
| 13.5 | 0.0135 |
| Hypothalamus | AAGGGTGCTG (2) CTAGACAGGC GTGGCCTGTG TGCTGCTTAA TGGTCAAAAA
| 12.6 | 0.0126 |
| E12.5 retina | AAGGGTGCTG (2)
| 1.9 | 0.0019 |
| E14.5 retina | TGGGTCAAAC
| 3.6 | 0.0036 |
| E18.5 retina | TGCTGCTTAA
| 1.8 | 0.0018 |
| P0.5 retina | TGGGTCAAAC TGGTCAAAAA
| 4 | 0.004 |
| P2.5 retina | AAGGGTGCTG (2) GTGGCCTGTG TGCTGCTTAA
| 5.4 | 0.0054 |
| P4.5 retina | AGAGCGAAGG TGGGTCAAAC TGGTCAAAAA
| 6 | 0.006 |
| P6.5 retina | AAGGGTGCTG (2) TGGGTCAAAC TGGTCAAAAA
| 6.7 | 0.0067 |
| P10.5 crx- retina | AGCTCGGAAT TGGTCAAAAA
| 5.6 | 0.0056 |
| P10.5 crx+ retina | AGAGCGAAGG TGGGTCAAAC TGGTCAAAAA
| 11.5 | 0.0115 |
| Adult retinal | AGAGCGAAGG CTAGACAGGC TGGGTCAAAC
| 13.1 | 0.0131 |
| ONL | TGGGTCAAAC TGGTCAAAAA
| 19.1 | 0.0191 |