| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | AAAAGCAGTG CCTGTCATCC (2) CTTCATTTGA (2)
| 4.8 | 0.0048 |
| Cb medulloblastoma | CTTCATTTGA (2) GATAAAGCAA (3) GCCAGCAACA
| 11.5 | 0.0115 |
| P8 GC+1d culture | CAGAGTCTAC (3) CCTGTCATCC (2) CTTCATTTGA (2) GATAAAGCAA (3) GCCAGCAACA
| 7.9 | 0.0079 |
| P8 GC+SHH+1d culture | AAAAGCAGTG CAGAGTCTAC (3) CCTGTCATCC (2) GATAAAGCAA (3) GCCAGCAACA GTGGATACTG
| 19.8 | 0.0198 |
| 3T3 fibroblasts | CTTCATTTGA (2) GCCAGCAACA
| 10.5 | 0.0105 |
| P1 cortex | AAAAGCAGTG GCCAGCAACA
| 9 | 0.009 |
| Hypothalamus | CTTCATTTGA (2) GCCAGCAACA GGGGTGGGGC GTCTGTTTGT (3)
| 10.8 | 0.0108 |
| E12.5 retina | GATAAAGCAA (3) GCCAGCAACA
| 5.7 | 0.0057 |
| E14.5 retina | CCTGTCATCC (2) GATAAAGCAA (3) GCCAGCAACA
| 5.4 | 0.0054 |
| E16.5 retina | GCCAGCAACA GTCTGTTTGT (3) GTGGATACTG
| 9 | 0.009 |
| E18.5 retina | GATAAAGCAA (3) GCCAGCAACA TGTATGTGGA (2)
| 5.4 | 0.0054 |
| P0.5 retina | AAAAGCAGTG GCCAGCAACA
| 11.8 | 0.0118 |
| P2.5 retina | CCTGTCATCC (2) CTTCATTTGA (2) GATAAAGCAA (3) GGGGTGGGGC
| 12.4 | 0.0124 |
| P4.5 retina | CTTCATTTGA (2) GATAAAGCAA (3)
| 4 | 0.004 |
| P6.5 retina | GATAAAGCAA (3)
| 1.7 | 0.0017 |
| P10.5 crx- retina | AAAAGCAGTG CCTGTCATCC (2) CTTCATTTGA (2) GCCAGCAACA
| 13.1 | 0.0131 |
| P10.5 crx+ retina | CCTGTCATCC (2) GATAAAGCAA (3) GCCAGCAACA GGGGTGGGGC
| 11.5 | 0.0115 |
| Adult retinal | CTTCATTTGA (2) GATAAAGCAA (3) GCCAGCAACA GTCTGTTTGT (3)
| 11.3 | 0.0113 |
| ONL | GATAAAGCAA (3) GCCAGCAACA TGTATGTGGA (2)
| 9.5 | 0.0095 |