| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | GAGATTTGCT GATGCTTACG
| 13 | 0.013 |
| Cb medulloblastoma | CTTTTAAAAA (2) GAGATTTGCT
| 4.6 | 0.0046 |
| P8 GC+1d culture | AAATGATTTA CTTTTAAAAA (2) GAGATTTGCT GATGCTTACG TTACATTTGA
| 12.5 | 0.0125 |
| P8 GC+SHH+1d culture | ATGACAACAA CTTTTAAAAA (2) GAGATTTGCT GATGCTTACG GTATGCTTAC
| 13 | 0.013 |
| E15 cortex | CTTTTAAAAA (2)
| 4.9 | 0.0049 |
| Hypothalamus | CTTTTAAAAA (2) GATGCTTACG GTGTCTTGGT
| 5.4 | 0.0054 |
| E12.5 retina | CATTTTATTA CTTTTAAAAA (2) GAGATTTGCT GATGCTTACG GTATGCTTAC GTGTCTTGGT
| 18.9 | 0.0189 |
| E14.5 retina | CTTTTAAAAA (2) GAGATTTGCT GATGCTTACG
| 12.7 | 0.0127 |
| E16.5 retina | CATTTTATTA CTTTTAAAAA (2) GATGCTTACG TTACATTTGA
| 10.8 | 0.0108 |
| E18.5 retina | CATTTTATTA CCTGCAAAAG CTTTTAAAAA (2) GATGCTTACG
| 16.4 | 0.0164 |
| P0.5 retina | GATGCTTACG
| 11.8 | 0.0118 |
| P2.5 retina | CCTGCAAAAG CTTTTAAAAA (2) GATGCTTACG GTGTCTTGGT TGTATGTATA (3)
| 19.4 | 0.0194 |
| P4.5 retina | CATTTTATTA CTTTTAAAAA (2) GATGCTTACG GTATGCTTAC
| 11.9 | 0.0119 |
| P6.5 retina | CTTTTAAAAA (2) GATGCTTACG GTATGCTTAC TGTATGTATA (3)
| 15.1 | 0.0151 |
| P10.5 crx- retina | ATGACAACAA CTTTTAAAAA (2) GAGATTTGCT GATGCTTACG GTGTCTTGGT
| 11.3 | 0.0113 |
| P10.5 crx+ retina | CTTTTAAAAA (2) GTGTCTTGGT TGTATGTATA (3)
| 5.7 | 0.0057 |
| Adult retinal | CATTTTATTA CCTGCAAAAG GATGCTTACG
| 7.5 | 0.0075 |
| ONL | AAATGATTTA ATGACAACAA CTTTTAAAAA (2) GATGCTTACG TGTATGTATA (3)
| 17.1 | 0.0171 |