| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | AAAAAAAAAA (2) ATTTTTTTTT (4) CGGCTGCAGT
| 207.1 | 0.2071 |
| Cb medulloblastoma | AAAAAAAAAA (2) AAAAAAAAAT (2) CGGCTGCAGT
| 804.7 | 0.8047 |
| P8 GC+1d culture | AAAAAAAAAA (2) AAAAAAAAAT (2) ATTTTTTTTT (4)
| 208.8 | 0.2088 |
| P8 GC+SHH+1d culture | AAAAAAAAAA (2) AAAAAAAAAT (2) ATTTTTTTTT (4) CGGCTGCAGT
| 289.3 | 0.2893 |
| 3T3 fibroblasts | AAAAAAAAAA (2)
| 28 | 0.028 |
| E15 cortex | AAAAAAAAAA (2)
| 212.8 | 0.2128 |
| P1 cortex | AAAAAAAAAA (2) AAAAAAAAAT (2) ATTTTTTTTT (4)
| 259 | 0.259 |
| Hypothalamus | AAAAAAAAAA (2)
| 123.2 | 0.1232 |
| E12.5 retina | AAAAAAAAAA (2) CGGCTGCAGT
| 140.8 | 0.1408 |
| E14.5 retina | AAAAAAAAAA (2) AAAAAAAAAT (2) ATTTTTTTTT (4) CGGCTGCAGT
| 103.8 | 0.1038 |
| E16.5 retina | AAAAAAAAAA (2) AAAAAAAAAT (2)
| 45.3 | 0.0453 |
| E18.5 retina | AAAAAAAAAA (2) AAAAAAAAAT (2) ATTTTTTTTT (4)
| 383.8 | 0.3838 |
| P0.5 retina | AAAAAAAAAA (2) AAAAAAAAAT (2) ATTTTTTTTT (4)
| 125.6 | 0.1256 |
| P2.5 retina | AAAAAAAAAA (2) AAAAAAAAAT (2) ATTTTTTTTT (4) CGGCTGCAGT
| 337.9 | 0.3379 |
| P4.5 retina | AAAAAAAAAA (2) AAAAAAAAAT (2) ATTTTTTTTT (4)
| 291.3 | 0.2913 |
| P6.5 retina | AAAAAAAAAA (2)
| 266.8 | 0.2668 |
| P10.5 crx- retina | AAAAAAAAAA (2) AAAAAAAAAT (2)
| 48.3 | 0.0483 |
| P10.5 crx+ retina | AAAAAAAAAA (2)
| 96.1 | 0.0961 |
| Adult retinal | AAAAAAAAAA (2) AAAAAAAAAT (2)
| 59.3 | 0.0593 |
| ONL | AAAAAAAAAA (2) AAAAAAAAAT (2)
| 105.3 | 0.1053 |