Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.3122	Ltbr	lymphotoxin B receptor	6	6 60.4 cM	17000
Gene Ontology	apoptosis | extracellular space | integral to membrane | lymph gland development | receptor activity
Human Homolog	LTBR[lymphotoxin beta receptor (TNFR superfamily, member 3)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 31 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GTACTGGTGG (2) TGTGGAGGAG (2) 3.2 0.0032 Cb medulloblastoma GTACTGGTGG (2) TGTGGAGGAG (2) 4.6 0.0046 P8 GC+1d culture TCTGGATGCT TGTGGAGGAG (2) 3.4 0.0034 P8 GC+SHH+1d culture TCTGGATGCT TGTGGAGGAG (2) 2.4 0.0024 3T3 fibroblasts TGTGGAGGAG (2) 3.5 0.0035 E15 cortex TGTGGAGGAG (2) 4.9 0.0049 Hypothalamus GTACTGGTGG (2) TCTGGATGCT TGTGGAGGAG (2) 10.8 0.0108 E12.5 retina TCTGTGCATC TGTGGAGGAG (2) 3.8 0.0038 E14.5 retina TCTGTGCATC TGTGGAGGAG (2) 3.6 0.0036 E16.5 retina TCTGTGCATC TGTGGAGGAG (2) 5.4 0.0054 E18.5 retina TGTGGAGGAG (2) 5.5 0.0055 P2.5 retina TGTGGAGGAG (2) 3.5 0.0035 P4.5 retina TGTGGAGGAG (2) 4 0.004 P6.5 retina GATACTGACA GTACTGGTGG (2) TGTGGAGGAG (2) 5.1 0.0051 P10.5 crx- retina TCTGGATGCT TGTGGAGGAG (2) 16.8 0.0168 P10.5 crx+ retina TGTGGAGGAG (2) 7.7 0.0077 Adult retinal TGTGGAGGAG (2) 3.7 0.0037 ONL TCTGGATGCT TCTGTGCATC 7.6 0.0076