Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.312328
2810481F14Rik
RIKEN cDNA 2810481F14 gene
12
104884
Gene Ontology
DNA repair
|
hydrolase activity
|
nucleus
Human Homolog
TDP1[tyrosyl-DNA phosphodiesterase 1]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 26 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
TGGGTGCCCT
(
2
)
6.5
0.0065
Cb medulloblastoma
TGGGGCCCTC
TGGGTGCCCT
(
2
)
6.9
0.0069
P8 GC+1d culture
TGGGGCCCTC
TGGGTGCCCT
(
2
)
4.5
0.0045
P8 GC+SHH+1d culture
CTGGGGCTCT
TGGGTGCCCT
(
2
)
4.7
0.0047
3T3 fibroblasts
TGGGTGCCCT
(
2
)
3.5
0.0035
E15 cortex
TGGGTGCCCT
(
2
)
4.9
0.0049
Hypothalamus
TGGGGCCCTC
TGGGTGCCCT
(
2
)
5.4
0.0054
E12.5 retina
CTGGGGCTCT
TGGGTGCCCT
(
2
)
7.5
0.0075
E14.5 retina
CTGGGGCTCT
TCTCTCACCC (
3
)
3.6
0.0036
E16.5 retina
TGGGTGCCCT
(
2
)
9.1
0.0091
E18.5 retina
TGGGTGCCCT
(
2
)
1.8
0.0018
P0.5 retina
TGGGTGCCCT
(
2
)
11.8
0.0118
P2.5 retina
TCTCTCACCC (
3
)
TGGGGCCCTC
3.6
0.0036
P4.5 retina
TGGGTGCCCT
(
2
)
4
0.004
P6.5 retina
TGGGGCCCTC
TGGGTGCCCT
(
2
)
3.4
0.0034
P10.5 crx- retina
TCTCTCACCC (
3
)
TGGGTGCCCT
(
2
)
5.6
0.0056
P10.5 crx+ retina
TGGGTGCCCT
(
2
)
1.9
0.0019